RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ADGRF1Q5T601 910 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 ZNF697Q5TEC3 545 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 NLRP14Q86W24 1093 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 LGI2Q8N0V4 545 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 LRRN4Q8WUT4 740 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 IGSF8Q969P0 613 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 HDAC11Q96DB2 347 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 CELF6Q96J87 481 aaKnown RBP18.49■□□□□ 0.55
VRK3-225ENST00000601912 ZFRQ96KR1 1074 aaKnown RBP18.49■□□□□ 0.55
VRK3-225ENST00000601912 GDAP1L1Q96MZ0 367 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 TSPYL1Q9H0U9 437 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 LSM7Q9UK45 103 aaKnown RBP18.49■□□□□ 0.55
VRK3-225ENST00000601912 AGO1Q9UL18 857 aaKnown RBP18.49■□□□□ 0.55
VRK3-225ENST00000601912 CHD7Q9P2D1 2997 aa18.49■□□□□ 0.55
VRK3-225ENST00000601912 OBSL1O75147 1896 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 C5orf60A6NFR6 353 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 SOBPA7XYQ1 873 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 ZNF197O14709 1029 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 GCATO75600 419 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 FAM153BP0C7A2 387 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 RBM10P98175 930 aaKnown RBP18.48■□□□□ 0.55
VRK3-225ENST00000601912 ZNF33AQ06730 810 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 PPIDQ08752 370 aaKnown RBP18.48■□□□□ 0.55
VRK3-225ENST00000601912 FAM153CQ494X1 144 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 FAM133BQ5BKY9 247 aaKnown RBP18.48■□□□□ 0.55
VRK3-225ENST00000601912 GPR158Q5T848 1215 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 LRRC49Q8IUZ0 686 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 NETO2Q8NC67 525 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 SHKBP1Q8TBC3 707 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 MRPL38Q96DV4 380 aaKnown RBP18.48■□□□□ 0.55
VRK3-225ENST00000601912 P2RY11Q96G91 374 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 KLC2Q9H0B6 622 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 PIDD1Q9HB75 910 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 FAM153AQ9UHL3 310 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 ZMYM5Q9UJ78 669 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 CHD9Q3L8U1 2897 aa18.48■□□□□ 0.55
VRK3-225ENST00000601912 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.47■□□□□ 0.55
VRK3-225ENST00000601912 EPOPA6NHQ4 379 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 DFFAO00273 331 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 ATP8B1O43520 1251 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 CCR2P41597 374 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 NDST2P52849 883 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 MORF4L2Q15014 288 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 C5orf22Q49AR2 442 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 ALFQ53S48 1182 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 TFAP2DQ7Z6R9 452 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 TP53INP2Q8IXH6 220 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 UMODL1-AS1Q8N2C9 162 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 SLC46A2Q9BY10 475 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 TASP1Q9H6P5 420 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 ZNF446Q9NWS9 450 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 ZNF510Q9Y2H8 683 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 SH3BP1Q9Y3L3 701 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 DENND4CQ5VZ89 1909 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 SMAPO00193 183 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 CNTN5O94779 1100 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 VAV1P15498 845 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 SLC6A4P31645 630 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 AVPR1AP37288 418 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 MAPKAPK2P49137 400 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 TEAD2Q15562 447 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 HIBCHQ6NVY1 386 aaPredicted RBP18.47■□□□□ 0.55
VRK3-225ENST00000601912 RFWD3Q6PCD5 774 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 ARHGEF18Q6ZSZ5 1173 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 GRASPQ7Z6J2 395 aaPredicted RBP18.47■□□□□ 0.55
VRK3-225ENST00000601912 ATPAF2Q8N5M1 289 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 TCEAL4Q96EI5 215 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 SLC39A8Q9C0K1 460 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 ADAM7Q9H2U9 754 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 SEPT10Q9P0V9 454 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 STOML2Q9UJZ1 356 aa18.47■□□□□ 0.55
VRK3-225ENST00000601912 RANBP2P49792 3224 aaKnown RBP18.47■□□□□ 0.55
VRK3-225ENST00000601912 A0A0A0MRY4 1105 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 NRLP54845 237 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 BASP1P80723 227 aaKnown RBP18.46■□□□□ 0.55
VRK3-225ENST00000601912 CASP8Q14790 479 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 STXBP5Q5T5C0 1151 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 TTC39BQ5VTQ0 682 aaPredicted RBP18.46■□□□□ 0.55
VRK3-225ENST00000601912 AFMIDQ63HM1 303 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 CEP128Q6ZU80 1094 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 ARHGAP12Q8IWW6 846 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 PPIL6Q8IXY8 311 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 CCDC13Q8IYE1 715 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 CMTM8Q8IZV2 173 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 CCDC110Q8TBZ0 833 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 SMG7Q92540 1137 aaKnown RBP18.46■□□□□ 0.55
VRK3-225ENST00000601912 ZNF707Q96C28 371 aaPredicted RBP18.46■□□□□ 0.55
VRK3-225ENST00000601912 SPATA13Q96N96 652 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 TSGA13Q96PP4 275 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 FUT8Q9BYC5 575 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 FOXP3Q9BZS1 431 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 SFXN1Q9H9B4 322 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 NDFIP2Q9NV92 336 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 DZANK1Q9NVP4 752 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 ARHGAP26Q9UNA1 814 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 SHOC2Q9UQ13 582 aa18.46■□□□□ 0.55
VRK3-225ENST00000601912 ARHGAP42A6NI28 874 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 RNF103O00237 685 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 RFXAPO00287 272 aa18.45■□□□□ 0.54
VRK3-225ENST00000601912 TP73O15350 636 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms