RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 CFAP99D6REC4 459 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 LIASO43766 372 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 TGM2P21980 687 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 ADRA1DP25100 572 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 KCNJ2P63252 427 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 C12orf29Q8N999 325 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 COLGALT1Q8NBJ5 622 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 SH3GL2Q99962 352 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 ORC6Q9Y5N6 252 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 MYH6P13533 1939 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 MTSS1O43312 755 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 MIPP30301 263 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 PDK2Q15119 407 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 POM121L1PQ3SYA9 428 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 ERAP2Q6P179 960 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 PRSS55Q6UWB4 352 aaPredicted RBP11.32□□□□□ -0.6
ZNF558-207ENST00000601372 FAM228AQ86W67 206 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 RASGEF1CQ8N431 466 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 FAM136AQ96C01 138 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 MIR1-1HGQ9H1L0 117 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 KLHL2O95198 593 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 C22orf31O95567 290 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 RPL17P18621 184 aaKnown RBP11.32□□□□□ -0.6
ZNF558-207ENST00000601372 NME5P56597 212 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 MCL1Q07820 350 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 FUKQ8N0W3 1084 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 RRN3Q9NYV6 651 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 ADGRA2Q96PE1 1338 aa11.32□□□□□ -0.6
ZNF558-207ENST00000601372 SCN7AQ01118 1682 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 RNF103-CHMP3A0A140T963 221 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 E9PBE3 544 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 KLHL41O60662 606 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 SLC6A3Q01959 620 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 EML3Q32P44 896 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 ZCWPW2Q504Y3 356 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 RAP1GAP2Q684P5 730 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 SLC39A5Q6ZMH5 540 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 EXOC3L1Q86VI1 746 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 SUN2Q9UH99 717 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 SLC24A2Q9UI40 661 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 V9GYQ6 96 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 ANXA9O76027 345 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 ZCCHC18P0CG32 403 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 COPAP53621 1224 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 ZNF284Q2VY69 593 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 ECHDC2Q86YB7 292 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 SCUBE1Q8IWY4 988 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 TOP6BLQ8N6T0 577 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 PXYLP1Q8TE99 480 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 SKA1Q96BD8 255 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 DHX33Q9H6R0 707 aaKnown RBP11.31□□□□□ -0.6
ZNF558-207ENST00000601372 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.31□□□□□ -0.6
ZNF558-207ENST00000601372 TM9SF1O15321 606 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 STX7O15400 261 aaKnown RBP11.31□□□□□ -0.6
ZNF558-207ENST00000601372 TPH1P17752 444 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 TKTP29401 623 aaKnown RBP11.31□□□□□ -0.6
ZNF558-207ENST00000601372 CRADDP78560 199 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 NFIL3Q16649 462 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 DSG4Q86SJ6 1040 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 NETO2Q8NC67 525 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 RNF217Q8TC41 542 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 FRMD8P1Q9BZ68 369 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-207ENST00000601372 ZDHHC6Q9H6R6 413 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 LATS2Q9NRM7 1088 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 WRAP73Q9P2S5 460 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-207ENST00000601372 THSD7AQ9UPZ6 1657 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 DSG1Q02413 1049 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 LRRC23Q53EV4 343 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-207ENST00000601372 STRA8Q7Z7C7 330 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 SLC26A11Q86WA9 606 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 CPNE8Q86YQ8 564 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 TBC1D19Q8N5T2 526 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 AVENQ9NQS1 362 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-207ENST00000601372 HIST1H2AGP0C0S8 130 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-207ENST00000601372 GFAPP14136 432 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 HIST1H2ADP20671 130 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 AMPD1P23109 780 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 ACOX1Q15067 660 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 C16orf89Q6UX73 402 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 CPA6Q8N4T0 437 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 LRRC57Q8N9N7 239 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 HIST1H2AHQ96KK5 128 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 HIST1H2AJQ99878 128 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 H2AFJQ9BTM1 129 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 NR2E1Q9Y466 385 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 KPNA3O00505 521 aaPredicted RBP11.31□□□□□ -0.6
ZNF558-207ENST00000601372 PFKMP08237 780 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 SERPINB3P29508 390 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 FDFT1P37268 417 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 GEMP55040 296 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 PHEXP78562 749 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 DPYSL3Q14195 570 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 USP6NLQ92738 828 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 CMTM5Q96DZ9 223 aa11.31□□□□□ -0.6
ZNF558-207ENST00000601372 NDRG2Q9UN36 371 aaKnown RBP11.31□□□□□ -0.6
ZNF558-207ENST00000601372 KDELR1P24390 212 aa11.3□□□□□ -0.6
ZNF558-207ENST00000601372 MGAT1P26572 445 aa11.3□□□□□ -0.6
ZNF558-207ENST00000601372 PRR23CQ6ZRP0 262 aa11.3□□□□□ -0.6
ZNF558-207ENST00000601372 ALLCQ8N6M5 410 aa11.3□□□□□ -0.6
ZNF558-207ENST00000601372 AUTS2Q8WXX7 1259 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms