RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 EFR3BQ9Y2G0 817 aa23.6■■□□□ 1.37
IRF3-227ENST00000600911 COL4A2P08572 1712 aa23.6■■□□□ 1.37
IRF3-227ENST00000600911 ANHXE9PGG2 379 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 HOXD9P28356 352 aaPredicted RBP23.59■■□□□ 1.37
IRF3-227ENST00000600911 LRRC31Q6UY01 552 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 OTOP3Q7RTS5 596 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 ELSPBP1Q96BH3 223 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 RPGRIP1Q96KN7 1286 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 FAM83CQ9BQN1 747 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 MAK16Q9BXY0 300 aaKnown RBP23.59■■□□□ 1.37
IRF3-227ENST00000600911 EBF3Q9H4W6 596 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 TMEM248Q9NWD8 314 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 DUS2Q9NX74 493 aaKnown RBP23.59■■□□□ 1.37
IRF3-227ENST00000600911 DTLQ9NZJ0 730 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 WASH4PA8MWX3 477 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 RHOQP17081 205 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 OTUD4Q01804 1114 aaKnown RBP23.59■■□□□ 1.37
IRF3-227ENST00000600911 C2orf54Q08AI8 447 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 FCHO2Q0JRZ9 810 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 PAFAH1B3Q15102 231 aaKnown RBP23.59■■□□□ 1.37
IRF3-227ENST00000600911 FSCBQ5H9T9 825 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 LY6G5CQ5SRR4 150 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 MFSD6LQ8IWD5 586 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.59■■□□□ 1.37
IRF3-227ENST00000600911 TMA16Q96EY4 203 aaKnown RBP23.59■■□□□ 1.37
IRF3-227ENST00000600911 PHF7Q9BWX1 381 aaPredicted RBP23.59■■□□□ 1.37
IRF3-227ENST00000600911 SPHK2Q9NRA0 654 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 HEY1Q9Y5J3 304 aa23.59■■□□□ 1.37
IRF3-227ENST00000600911 CYP17A1P05093 508 aa23.58■■□□□ 1.36
IRF3-227ENST00000600911 MTA1Q13330 715 aa23.58■■□□□ 1.36
IRF3-227ENST00000600911 GAB4Q2WGN9 574 aa23.58■■□□□ 1.36
IRF3-227ENST00000600911 CCDC181Q5TID7 509 aa23.58■■□□□ 1.36
IRF3-227ENST00000600911 CXorf57Q6NSI4 855 aaKnown RBP23.58■■□□□ 1.36
IRF3-227ENST00000600911 ARHGAP36Q6ZRI8 547 aa23.58■■□□□ 1.36
IRF3-227ENST00000600911 ACTL9Q8TC94 416 aa23.58■■□□□ 1.36
IRF3-227ENST00000600911 CARD6Q9BX69 1037 aa23.58■■□□□ 1.36
IRF3-227ENST00000600911 RBM12Q9NTZ6 932 aaKnown RBP23.58■■□□□ 1.36
IRF3-227ENST00000600911 ECI2O75521 394 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 TJP3O95049 919 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 HTR7P34969 479 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 CHKAP35790 457 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 ZNF135P52742 658 aaPredicted RBP23.57■■□□□ 1.36
IRF3-227ENST00000600911 TFDP2Q14188 446 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 WHAMMP3Q1A5X7 153 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 RNF43Q68DV7 783 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 ASTLQ6HA08 431 aaPredicted RBP23.57■■□□□ 1.36
IRF3-227ENST00000600911 TTC27Q6P3X3 843 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 TMCO3Q6UWJ1 677 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 TTC8Q8TAM2 541 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 DDI1Q8WTU0 396 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 DEPDC1BQ8WUY9 529 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 IRF7Q92985 503 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 SLC39A8Q9C0K1 460 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 CATSPERBQ9H7T0 1116 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 TBC1D14Q9P2M4 693 aa23.57■■□□□ 1.36
IRF3-227ENST00000600911 APOC4-APOC2K7ER74 178 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 TRIM24O15164 1050 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 FGF10O15520 208 aaPredicted RBP23.56■■□□□ 1.36
IRF3-227ENST00000600911 APOC2P02655 101 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 CETN2P41208 172 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 SNX1Q13596 522 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 NOMO1Q15155 1222 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 DHCR24Q15392 516 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 RABGAP1LQ5R372 815 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 AFMIDQ63HM1 303 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 NAIF1Q69YI7 327 aaPredicted RBP23.56■■□□□ 1.36
IRF3-227ENST00000600911 ZNF572Q7Z3I7 529 aaPredicted RBP23.56■■□□□ 1.36
IRF3-227ENST00000600911 C12orf40Q86WS4 652 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 HJURPQ8NCD3 748 aaPredicted RBP23.56■■□□□ 1.36
IRF3-227ENST00000600911 CHFRQ96EP1 664 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 DDX50Q9BQ39 737 aaKnown RBP23.56■■□□□ 1.36
IRF3-227ENST00000600911 LIMD1Q9UGP4 676 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 DNPEPQ9ULA0 475 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 KIAA1549LQ6ZVL6 1849 aa23.56■■□□□ 1.36
IRF3-227ENST00000600911 A0A1B0GVM2 712 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 TCAF2A6NFQ2 919 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 NEDD8-MDP1E9PL57 170 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 ARNTLO00327 626 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 KRIT1O00522 736 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 PENKP01210 267 aaPredicted RBP23.55■■□□□ 1.36
IRF3-227ENST00000600911 PSMC3P17980 439 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 IFNAR2P48551 515 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 CDH4P55283 916 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 MRPS25P82663 173 aaKnown RBP23.55■■□□□ 1.36
IRF3-227ENST00000600911 ACBD5Q5T8D3 534 aaPredicted RBP23.55■■□□□ 1.36
IRF3-227ENST00000600911 CARNMT1Q8N4J0 409 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 SPATA4Q8NEY3 305 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 OLFM3Q96PB7 478 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 LRRC19Q9H756 370 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 A0A0D9SEW6 157 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 ASGR2P07307 311 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 TGM2P21980 687 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 ACVRL1P37023 503 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 KCNJ1P48048 391 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 NRLP54845 237 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 MESP2Q0VG99 397 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 AAK1Q2M2I8 961 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 MPPE1Q53F39 396 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 BBS2Q9BXC9 721 aa23.55■■□□□ 1.36
IRF3-227ENST00000600911 DDX47Q9H0S4 455 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms