RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 XPO4Q9C0E2 1151 aaKnown RBP9.07□□□□□ -0.96
SSBP4-208ENST00000600628 TKTL2Q9H0I9 626 aa9.07□□□□□ -0.96
SSBP4-208ENST00000600628 OSBPL2Q9H1P3 480 aa9.07□□□□□ -0.96
SSBP4-208ENST00000600628 PDCL3Q9H2J4 239 aa9.07□□□□□ -0.96
SSBP4-208ENST00000600628 RETREG1Q9H6L5 497 aa9.07□□□□□ -0.96
SSBP4-208ENST00000600628 WDCPQ9H6R7 721 aa9.07□□□□□ -0.96
SSBP4-208ENST00000600628 POLMQ9NP87 494 aaPredicted RBP9.07□□□□□ -0.96
SSBP4-208ENST00000600628 PARD6AQ9NPB6 346 aa9.07□□□□□ -0.96
SSBP4-208ENST00000600628 METTL5Q9NRN9 209 aaKnown RBP9.07□□□□□ -0.96
SSBP4-208ENST00000600628 TMPRSS4Q9NRS4 437 aa9.07□□□□□ -0.96
SSBP4-208ENST00000600628 USP36Q9P275 1121 aaKnown RBP9.07□□□□□ -0.96
SSBP4-208ENST00000600628 PPARGC1AQ9UBK2 798 aaKnown RBP9.07□□□□□ -0.96
SSBP4-208ENST00000600628 BZW2Q9Y6E2 419 aaKnown RBP9.07□□□□□ -0.96
SSBP4-208ENST00000600628 PCDH15Q96QU1 1955 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 TMEM191CA6NGB0 347 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 F5H5T6 163 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 GOLGA8SH3BPF8 625 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 DCLK1O15075 740 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 AP5Z1O43299 807 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 CLDN11O75508 207 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 CNTN5O94779 1100 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 EPN2O95208 641 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 GJB6O95452 261 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 ASLP04424 464 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 KRT3P12035 628 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 BCKDHBP21953 392 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 RRM1P23921 792 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 RDXP35241 583 aaKnown RBP9.06□□□□□ -0.96
SSBP4-208ENST00000600628 CSKP41240 450 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 SULT1E1P49888 294 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 CDH4P55283 916 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 RNASE9P60153 205 aaKnown RBP9.06□□□□□ -0.96
SSBP4-208ENST00000600628 DEUP1Q05D60 604 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 NME3Q13232 169 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 MAMLD1Q13495 774 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 C15orf59Q2T9L4 293 aaPredicted RBP9.06□□□□□ -0.96
SSBP4-208ENST00000600628 USP39Q53GS9 565 aaKnown RBP9.06□□□□□ -0.96
SSBP4-208ENST00000600628 PITRM1Q5JRX3 1037 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 SDE2Q6IQ49 451 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 SARM1Q6SZW1 724 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 C11orf74Q86VG3 221 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 NLRP14Q86W24 1093 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 CHSY1Q86X52 802 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 MFN1Q8IWA4 741 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 CHPFQ8IZ52 775 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 FNIP1Q8TF40 1166 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 FRS2Q8WU20 508 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 UCMAQ8WVF2 138 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 FAM131CQ96AQ9 280 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 VOPP1Q96AW1 172 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 PCMTD1Q96MG8 357 aaPredicted RBP9.06□□□□□ -0.96
SSBP4-208ENST00000600628 FEM1AQ9BSK4 669 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 TSPY26PQ9H489 355 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 KIAA1522Q9P206 1035 aaPredicted RBP9.06□□□□□ -0.96
SSBP4-208ENST00000600628 ARHGAP20Q9P2F6 1191 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 SLC12A6Q9UHW9 1150 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 PAXBP1Q9Y5B6 917 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 PCDHGA5Q9Y5G8 931 aa9.06□□□□□ -0.96
SSBP4-208ENST00000600628 IGHV1OR15-9A0A0B4J2B8 117 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 TCRBV21S2A2A0A5A6 115 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 E9PAM4 449 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 FAM72CH0Y354 149 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 RTN2O75298 545 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 ZMPSTE24O75844 475 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 RHOBTB1O94844 696 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 FTLP02792 175 aaPredicted RBP9.05□□□□□ -0.96
SSBP4-208ENST00000600628 ATP5BP06576 529 aaKnown RBP9.05□□□□□ -0.96
SSBP4-208ENST00000600628 SRPRAP08240 638 aaKnown RBP9.05□□□□□ -0.96
SSBP4-208ENST00000600628 SKILP12757 684 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 MZF1P28698 734 aaPredicted RBP9.05□□□□□ -0.96
SSBP4-208ENST00000600628 SDC4P31431 198 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 WASP42768 502 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 ID4P47928 161 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 AIF1P55008 147 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 TPM4P67936 248 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 LMNB2Q03252 620 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 TBX2Q13207 712 aaPredicted RBP9.05□□□□□ -0.96
SSBP4-208ENST00000600628 ASIC2Q16515 512 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 CSRP2Q16527 193 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 HNRNPA1L2Q32P51 320 aaKnown RBP9.05□□□□□ -0.96
SSBP4-208ENST00000600628 ALFQ53S48 1182 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 RABGAP1LQ5R372 815 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 C9orf64Q5T6V5 341 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 FAM72AQ5TYM5 149 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 FAM72DQ6L9T8 149 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 SETD3Q86TU7 594 aaPredicted RBP9.05□□□□□ -0.96
SSBP4-208ENST00000600628 FAM72BQ86X60 149 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 CIR1Q86X95 450 aaPredicted RBP9.05□□□□□ -0.96
SSBP4-208ENST00000600628 FAM131BQ86XD5 332 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 VSTM4Q8IW00 320 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 APCDD1Q8J025 514 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 FRMD1Q8N878 549 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 RMDN1Q96DB5 314 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 RPRD1AQ96P16 312 aaPredicted RBP9.05□□□□□ -0.96
SSBP4-208ENST00000600628 FAM129BQ96TA1 746 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 PSMB7Q99436 277 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 CNPY3Q9BT09 278 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 MAGEB5Q9BZ81 275 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 TPSD1Q9BZJ3 242 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 FBRSQ9HAH7 460 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms