RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 POLR2EP19388 210 aaKnown RBP18.32■□□□□ 0.52
SSBP4-207ENST00000600244 LONP1P36776 959 aaKnown RBP18.32■□□□□ 0.52
SSBP4-207ENST00000600244 KRT85P78386 507 aa18.32■□□□□ 0.52
SSBP4-207ENST00000600244 STAT4Q14765 748 aa18.32■□□□□ 0.52
SSBP4-207ENST00000600244 TRIP4Q15650 581 aaPredicted RBP18.32■□□□□ 0.52
SSBP4-207ENST00000600244 HIST2H2BCQ6DN03 193 aa18.32■□□□□ 0.52
SSBP4-207ENST00000600244 TTC17Q96AE7 1141 aa18.32■□□□□ 0.52
SSBP4-207ENST00000600244 TMA16Q96EY4 203 aaKnown RBP18.32■□□□□ 0.52
SSBP4-207ENST00000600244 CAAP1Q9H8G2 361 aa18.32■□□□□ 0.52
SSBP4-207ENST00000600244 GEMIN8Q9NWZ8 242 aaKnown RBP18.32■□□□□ 0.52
SSBP4-207ENST00000600244 CYTH4Q9UIA0 394 aa18.32■□□□□ 0.52
SSBP4-207ENST00000600244 STOML2Q9UJZ1 356 aa18.32■□□□□ 0.52
SSBP4-207ENST00000600244 DMTF1Q9Y222 760 aa18.32■□□□□ 0.52
SSBP4-207ENST00000600244 SRPRBQ9Y5M8 271 aaKnown RBP18.32■□□□□ 0.52
SSBP4-207ENST00000600244 ITPR2Q14571 2701 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 TBC1D3DA0A087WVF3 549 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 TBC1D3IA0A087WXS9 549 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 TBC1D3EA0A087X179 549 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 TBC1D3KA0A087X1G2 549 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 SLC12A8A0AV02 714 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 TBC1D3FA6NER0 549 aaPredicted RBP18.31■□□□□ 0.52
SSBP4-207ENST00000600244 TBC1D3LB9A6J9 549 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 SPTLC2O15270 562 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 PIAS2O75928 621 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 TBC1D3HP0C7X1 549 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 THEGLP0DJG4 465 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 ADORA2BP29275 332 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 CD70P32970 193 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 NUDT1P36639 197 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 SRSF6Q13247 344 aaKnown RBP18.31■□□□□ 0.52
SSBP4-207ENST00000600244 IGFBP7Q16270 282 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 SNRNP35Q16560 246 aaKnown RBP18.31■□□□□ 0.52
SSBP4-207ENST00000600244 TBR1Q16650 682 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 TBC1D3GQ6DHY5 549 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 TBC1D3CQ6IPX1 549 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 TBC1D3Q8IZP1 549 aaPredicted RBP18.31■□□□□ 0.52
SSBP4-207ENST00000600244 RDH13Q8NBN7 331 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 IFI44Q8TCB0 444 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 WFDC5Q8TCV5 224 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 FAM131CQ96AQ9 280 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 CCDC127Q96BQ5 260 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 PLD4Q96BZ4 506 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 LMLNQ96KR4 655 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 MRGPRX3Q96LB0 322 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 EPN3Q9H201 632 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 NLGN3Q9NZ94 848 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 HMGXB4Q9UGU5 601 aa18.31■□□□□ 0.52
SSBP4-207ENST00000600244 DOCK9Q9BZ29 2069 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 TARSL2A2RTX5 802 aaKnown RBP18.3■□□□□ 0.52
SSBP4-207ENST00000600244 C5AR1P21730 350 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 HOXD13P35453 343 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 AFMP43652 599 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 NDST1P52848 882 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 ZNF445P59923 1031 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 CYP24A1Q07973 514 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 STK38Q15208 465 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 ZNF667Q5HYK9 610 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 KDM1BQ8NB78 822 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 WDR36Q8NI36 951 aaKnown RBP18.3■□□□□ 0.52
SSBP4-207ENST00000600244 ELMO3Q96BJ8 720 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 KLHDC7BQ96G42 594 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 STRIP2Q9ULQ0 834 aa18.3■□□□□ 0.52
SSBP4-207ENST00000600244 TDRD6O60522 2096 aaKnown RBP18.29■□□□□ 0.52
SSBP4-207ENST00000600244 ITGA2BP08514 1039 aa18.29■□□□□ 0.52
SSBP4-207ENST00000600244 ALPPL2P10696 532 aa18.29■□□□□ 0.52
SSBP4-207ENST00000600244 MAT2AP31153 395 aaKnown RBP18.29■□□□□ 0.52
SSBP4-207ENST00000600244 SGSHP51688 502 aa18.29■□□□□ 0.52
SSBP4-207ENST00000600244 KCNMA1Q12791 1236 aa18.29■□□□□ 0.52
SSBP4-207ENST00000600244 TGIF1Q15583 401 aa18.29■□□□□ 0.52
SSBP4-207ENST00000600244 FOXR1Q6PIV2 292 aa18.29■□□□□ 0.52
SSBP4-207ENST00000600244 SCARA5Q6ZMJ2 495 aa18.29■□□□□ 0.52
SSBP4-207ENST00000600244 CLEC17AQ6ZS10 378 aa18.29■□□□□ 0.52
SSBP4-207ENST00000600244 UNC93AQ86WB7 457 aa18.29■□□□□ 0.52
SSBP4-207ENST00000600244 SCAND2PQ9GZW5 306 aaPredicted RBP18.29■□□□□ 0.52
SSBP4-207ENST00000600244 KDM4CQ9H3R0 1056 aa18.29■□□□□ 0.52
SSBP4-207ENST00000600244 STK17AQ9UEE5 414 aa18.29■□□□□ 0.52
SSBP4-207ENST00000600244 CA5BQ9Y2D0 317 aa18.29■□□□□ 0.52
SSBP4-207ENST00000600244 PRAMEF26H0Y7S4 382 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 K7ESM1 405 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 SCAMP1O15126 338 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 IDEP14735 1019 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 DRD3P35462 400 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 PSMD8P48556 350 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 ST8SIA6P61647 398 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 CLCA4Q14CN2 919 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 ZNF699Q32M78 642 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 ADGRF1Q5T601 910 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 RBM44Q6ZP01 1051 aaKnown RBP18.28■□□□□ 0.52
SSBP4-207ENST00000600244 ARRDC3Q96B67 414 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 LRRC4CQ9HCJ2 640 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 EVA1BQ9NVM1 165 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 ACSL6Q9UKU0 697 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 INTS6Q9UL03 887 aaKnown RBP18.28■□□□□ 0.52
SSBP4-207ENST00000600244 PCDHGA7Q9Y5G6 932 aa18.28■□□□□ 0.52
SSBP4-207ENST00000600244 ADH1BP00325 375 aa18.27■□□□□ 0.52
SSBP4-207ENST00000600244 ASLP04424 464 aa18.27■□□□□ 0.52
SSBP4-207ENST00000600244 SKIDA1Q1XH10 827 aa18.27■□□□□ 0.52
SSBP4-207ENST00000600244 MPP7Q5T2T1 576 aa18.27■□□□□ 0.52
SSBP4-207ENST00000600244 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.27■□□□□ 0.52
SSBP4-207ENST00000600244 SV2BQ7L1I2 683 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms