RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 ETV4P43268 484 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 NEK3P51956 506 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 ARPP19P56211 112 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 SARNPP82979 210 aaKnown RBP14.84□□□□□ -0.03
VRK3-217ENST00000599538 CTXN3Q4LDR2 81 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 PLEKHG4Q58EX7 1191 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 TTC39BQ5VTQ0 682 aaPredicted RBP14.84□□□□□ -0.03
VRK3-217ENST00000599538 STEAP4Q687X5 459 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 PDZD4Q76G19 769 aaPredicted RBP14.84□□□□□ -0.03
VRK3-217ENST00000599538 BEND5Q7L4P6 421 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 TRPM8Q7Z2W7 1104 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 C14orf80Q86SX3 495 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 ARHGAP12Q8IWW6 846 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 USP33Q8TEY7 942 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 ZNF75CPQ92670 426 aaPredicted RBP14.84□□□□□ -0.03
VRK3-217ENST00000599538 SCLYQ96I15 445 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 FCRL2Q96LA5 508 aaPredicted RBP14.84□□□□□ -0.03
VRK3-217ENST00000599538 FAM111AQ96PZ2 611 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 APOL2Q9BQE5 337 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 FTHL17Q9BXU8 183 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.84□□□□□ -0.03
VRK3-217ENST00000599538 UNC93B1Q9H1C4 597 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 MARCH5Q9NX47 278 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 KANSL3Q9P2N6 904 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 ADAM28Q9UKQ2 775 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 PHTF1Q9UMS5 762 aa14.84□□□□□ -0.03
VRK3-217ENST00000599538 MAGED2Q9UNF1 606 aaPredicted RBP14.84□□□□□ -0.03
VRK3-217ENST00000599538 LAMA2P24043 3122 aaKnown RBP14.84□□□□□ -0.03
VRK3-217ENST00000599538 TOP3BO95985 862 aaKnown RBP14.83□□□□□ -0.04
VRK3-217ENST00000599538 JCHAINP01591 159 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 F7P08709 466 aaPredicted RBP14.83□□□□□ -0.04
VRK3-217ENST00000599538 SNRPAP09012 282 aaKnown RBP14.83□□□□□ -0.04
VRK3-217ENST00000599538 NFKB1P19838 968 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 SLC11A1P49279 550 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 ACTN3Q08043 901 aaPredicted RBP14.83□□□□□ -0.04
VRK3-217ENST00000599538 TEX44Q53QW1 395 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 MROH9Q5TGP6 573 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 ABI1Q8IZP0 508 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 CNTD1Q8N815 330 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 MPP6Q9NZW5 540 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 ZNF180Q9UJW8 692 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 SLC27A5Q9Y2P5 690 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 PSAT1Q9Y617 370 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.83□□□□□ -0.04
VRK3-217ENST00000599538 DFFAO00273 331 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 NCAM2O15394 837 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 FSBPO95073 299 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 TBX18O95935 607 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 GSTA2P09210 222 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 MRPL58Q14197 206 aaKnown RBP14.83□□□□□ -0.04
VRK3-217ENST00000599538 LACTB2Q53H82 288 aaPredicted RBP14.83□□□□□ -0.04
VRK3-217ENST00000599538 MANEALQ5VSG8 457 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 KCTD11Q693B1 232 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 RGS9BPQ6ZS82 235 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 TAS1R1Q7RTX1 841 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 DCP1BQ8IZD4 617 aaKnown RBP14.83□□□□□ -0.04
VRK3-217ENST00000599538 NUP93Q8N1F7 819 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 CCDC63Q8NA47 563 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 ANKLE1Q8NAG6 615 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 LRRC8CQ8TDW0 803 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 ALKBH8Q96BT7 664 aaKnown RBP14.83□□□□□ -0.04
VRK3-217ENST00000599538 APOPT1Q96IL0 206 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 FCRL3Q96P31 734 aaPredicted RBP14.83□□□□□ -0.04
VRK3-217ENST00000599538 FERMT1Q9BQL6 677 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 RASSF4Q9H2L5 321 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 KDM4CQ9H3R0 1056 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 GMIPQ9P107 970 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 PCDHB7Q9Y5E2 793 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 RAD54BQ9Y620 910 aa14.83□□□□□ -0.04
VRK3-217ENST00000599538 TM9SF1O15321 606 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 EDF1O60869 148 aaKnown RBP14.82□□□□□ -0.04
VRK3-217ENST00000599538 FKTNO75072 461 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 ALDH1A2O94788 518 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 SUN1O94901 812 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 VNN2O95498 520 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 AP2A1O95782 977 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 MX2P20592 715 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 CCR1P32246 355 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 SERPINB6P35237 376 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 SCTRP47872 440 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 CRYMQ14894 314 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 FAM133BQ5BKY9 247 aaKnown RBP14.82□□□□□ -0.04
VRK3-217ENST00000599538 BRMS1LQ5PSV4 323 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 OTOP3Q7RTS5 596 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 HAPLN3Q96S86 360 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 GBA3Q9H227 469 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 HS3ST4Q9Y661 456 aa14.82□□□□□ -0.04
VRK3-217ENST00000599538 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.81□□□□□ -0.04
VRK3-217ENST00000599538 KCNU1A8MYU2 1149 aa14.81□□□□□ -0.04
VRK3-217ENST00000599538 PQBP1O60828 265 aaKnown RBP14.81□□□□□ -0.04
VRK3-217ENST00000599538 KRT37O76014 449 aa14.81□□□□□ -0.04
VRK3-217ENST00000599538 GNRH1P01148 92 aa14.81□□□□□ -0.04
VRK3-217ENST00000599538 DHRS4L1P0CG22 281 aa14.81□□□□□ -0.04
VRK3-217ENST00000599538 NIPAL4Q0D2K0 466 aa14.81□□□□□ -0.04
VRK3-217ENST00000599538 RTP2Q5QGT7 225 aa14.81□□□□□ -0.04
VRK3-217ENST00000599538 OTOAQ7RTW8 1153 aa14.81□□□□□ -0.04
VRK3-217ENST00000599538 CRIPAKQ8N1N5 446 aa14.81□□□□□ -0.04
VRK3-217ENST00000599538 BCL7CQ8WUZ0 217 aaPredicted RBP14.81□□□□□ -0.04
VRK3-217ENST00000599538 FUBP3Q96I24 572 aaKnown RBP eCLIP14.81□□□□□ -0.04
VRK3-217ENST00000599538 TEKT5Q96M29 485 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms