RNA–Protein interactions for RNA: ENST00000599078.1

LINC00664-203, long intergenic non-protein coding RNA 664, humanhuman

TSL 1 (best) BASIC

Gene LINC00664, Length 3,760 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00664-203ENST00000599078 USP1O94782 785 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 KPNA2P52292 529 aaKnown RBP13.2□□□□□ -0.3
LINC00664-203ENST00000599078 TDRD5Q8NAT2 981 aaKnown RBP13.2□□□□□ -0.3
LINC00664-203ENST00000599078 IFT43Q96FT9 208 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 CATSPER2Q96P56 530 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 PTPRHQ9HD43 1115 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 TP73O15350 636 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 BUD23O43709 281 aaKnown RBP13.2□□□□□ -0.3
LINC00664-203ENST00000599078 CNTFP26441 200 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 ADRA1BP35368 520 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 CTBP1Q13363 440 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 PSTKQ8IV42 348 aaKnown RBP13.2□□□□□ -0.3
LINC00664-203ENST00000599078 ZNF567Q8N184 647 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 ZNF398Q8TD17 642 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 SLC35F5Q8WV83 523 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 PHF21BQ96EK2 531 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 SNX27Q96L92 541 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 DDX50Q9BQ39 737 aaKnown RBP13.2□□□□□ -0.3
LINC00664-203ENST00000599078 DUSP16Q9BY84 665 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 CXCL16Q9H2A7 254 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 IL1RL2Q9HB29 575 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 CHRAC1Q9NRG0 131 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 PLA2G4CQ9UP65 541 aa13.2□□□□□ -0.3
LINC00664-203ENST00000599078 TAF1LQ8IZX4 1826 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 IGKV6-21A0A0C4DH24 114 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 YJEFN3A6XGL0 299 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 E7ENQ6 273 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 ZBTB24O43167 697 aaPredicted RBP13.19□□□□□ -0.3
LINC00664-203ENST00000599078 TIMM44O43615 452 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 TRIM13O60858 407 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 GRK2P25098 689 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 GCAP28676 217 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 KYAT3Q6YP21 454 aaKnown RBP13.19□□□□□ -0.3
LINC00664-203ENST00000599078 RELL1Q8IUW5 271 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 MAML3Q96JK9 1138 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 USP29Q9HBJ7 922 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 NT5MQ9NPB1 228 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 SNX15Q9NRS6 342 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 EPS15L1Q9UBC2 864 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 ZMYND8Q9ULU4 1186 aaPredicted RBP13.19□□□□□ -0.3
LINC00664-203ENST00000599078 MTSS1O43312 755 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 F9P00740 461 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 TSHRP16473 764 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 PTPN7P35236 360 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 NME5P56597 212 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 CCDC15Q0P6D6 951 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 FSCN1Q16658 493 aaKnown RBP13.19□□□□□ -0.3
LINC00664-203ENST00000599078 RIPOR1Q6ZS17 1223 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 PTAR1Q7Z6K3 402 aaPredicted RBP13.19□□□□□ -0.3
LINC00664-203ENST00000599078 CAND1Q86VP6 1230 aaKnown RBP13.19□□□□□ -0.3
LINC00664-203ENST00000599078 GSTCDQ8NEC7 633 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 TMEM174Q8WUU8 243 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 RMDN1Q96DB5 314 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 SLC4A5Q9BY07 1137 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 NMRAL1Q9HBL8 299 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 TCF7L2Q9NQB0 619 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 TMEM216Q9P0N5 145 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.19□□□□□ -0.3
LINC00664-203ENST00000599078 ARHGAP26Q9UNA1 814 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 ACOT9Q9Y305 439 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 HACD1B0YJ81 288 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 PIGNO95427 931 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 FGFR1P11362 822 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 LHX1P48742 406 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 UGP2Q16851 508 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 ZNF470Q6ECI4 717 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 OTOP3Q7RTS5 596 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 TMEM110Q86TL2 294 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 TP53INP2Q8IXH6 220 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 DDIASQ8IXT1 998 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 ATP6V1E2Q96A05 226 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 AGAP2Q99490 1192 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 RHOBTB2Q9BYZ6 727 aa13.19□□□□□ -0.3
LINC00664-203ENST00000599078 WDR55Q9H6Y2 383 aaPredicted RBP13.19□□□□□ -0.3
LINC00664-203ENST00000599078 HBS1LQ9Y450 684 aaKnown RBP13.19□□□□□ -0.3
LINC00664-203ENST00000599078 ZBTB42B2RXF5 422 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 ODC1P11926 461 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 MRPS35P82673 323 aaKnown RBP13.18□□□□□ -0.3
LINC00664-203ENST00000599078 TBL3Q12788 808 aaKnown RBP13.18□□□□□ -0.3
LINC00664-203ENST00000599078 SLC10A2Q12908 348 aaPredicted RBP13.18□□□□□ -0.3
LINC00664-203ENST00000599078 SPDYAQ5MJ70 313 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 OVOS1Q6IE37 1185 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 STRADAQ7RTN6 431 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 IFNEQ86WN2 208 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 SEPT5Q99719 369 aaPredicted RBP13.18□□□□□ -0.3
LINC00664-203ENST00000599078 ST3GAL5Q9UNP4 418 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 EME2A4GXA9 379 aaPredicted RBP13.18□□□□□ -0.3
LINC00664-203ENST00000599078 XPO1O14980 1071 aaKnown RBP13.18□□□□□ -0.3
LINC00664-203ENST00000599078 STMN1P16949 149 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 PAPOLAP51003 745 aaKnown RBP13.18□□□□□ -0.3
LINC00664-203ENST00000599078 PGGT1BP53609 377 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 PKNOX1P55347 436 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 EFEMP1Q12805 493 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 CDH17Q12864 832 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 MED21Q13503 144 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 MOGSQ13724 837 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 ZNF235Q14590 738 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 PLEKHG4Q58EX7 1191 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 SEL1L3Q68CR1 1132 aa13.18□□□□□ -0.3
LINC00664-203ENST00000599078 TRNP1Q6NT89 227 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms