RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 YWHAQP27348 245 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 MFAP3P55082 362 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 PPM1KQ8N3J5 372 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 PDZD8Q8NEN9 1154 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 TSC1Q92574 1164 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 SLC6A18Q96N87 628 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 ELF4Q99607 663 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 ACE2Q9BYF1 805 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 SDCBP2Q9H190 292 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 LHX5Q9H2C1 402 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 CYP3A43Q9HB55 503 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 WDR35Q9P2L0 1181 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 MYO6Q9UM54 1294 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 CNTN6Q9UQ52 1028 aa14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 TEP1Q99973 2627 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-218ENST00000598907 CLDN5O00501 218 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 TACC1O75410 805 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 EPHX1P07099 455 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 MYF5P13349 255 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 P4HA1P13674 534 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 CD27P26842 260 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 CASP14P31944 242 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 TNNC1P63316 161 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 GABREP78334 506 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 INSM1Q01101 510 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 GEN1Q17RS7 908 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 DCBLD1Q8N8Z6 715 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 MYCBPAPQ8TBZ2 947 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 SORCS1Q8WY21 1168 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 SHC3Q92529 594 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 HIC2Q96JB3 615 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 OSGEPQ9NPF4 335 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 MARK1Q9P0L2 795 aa14.48□□□□□ -0.09
SHKBP1-218ENST00000598907 TERTO14746 1132 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 DFNA5O60443 496 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 BCAT1P54687 386 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 ZBED6P86452 979 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 INCA1Q0VD86 236 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 ZNF234Q14588 700 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 DRAP1Q14919 205 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 SHBQ15464 509 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 SERPINA13PQ6UXR4 307 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 ZNF574Q6ZN55 896 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 NUP93Q8N1F7 819 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 SCAMP5Q8TAC9 235 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 SAP25Q8TEE9 199 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 ANP32BQ92688 251 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 ZNF578Q96N58 590 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 PPP1R9BQ96SB3 815 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 SMYD3Q9H7B4 428 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 NLRC4Q9NPP4 1024 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 WDR70Q9NW82 654 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 THAP10Q9P2Z0 257 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 LSM7Q9UK45 103 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 CKAP5Q14008 2032 aa14.47□□□□□ -0.09
SHKBP1-218ENST00000598907 MYH10P35580 1976 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 FAM47DPA6NHR8 397 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 F8VZ95 297 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 FOXN3O00409 490 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 GP1BBP13224 206 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 WARSP23381 471 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 EPHA8P29322 1005 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 HNRNPH3P31942 346 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 HTR3DQ70Z44 454 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 DRC7Q8IY82 874 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 FAM71AQ8IYT1 594 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 TTC39CQ8N584 583 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 ZNF366Q8N895 744 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 TC2NQ8N9U0 490 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 SPC24Q8NBT2 197 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 UCMAQ8WVF2 138 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 CPLX3Q8WVH0 158 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 P2RY11Q96G91 374 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 MMS19Q96T76 1030 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 MRPL45Q9BRJ2 306 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 CIPCQ9C0C6 399 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 ELOVL4Q9GZR5 314 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 BTBD1Q9H0C5 482 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 DPEP3Q9H4B8 488 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 CISHQ9NSE2 258 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 AIPL1Q9NZN9 384 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 LUC7L2Q9Y383 392 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 PAXBP1Q9Y5B6 917 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 NME7Q9Y5B8 376 aa14.46□□□□□ -0.09
SHKBP1-218ENST00000598907 AKR1B15C9JRZ8 316 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 VILLO15195 856 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 GREM1O60565 184 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 TLR5O60602 858 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 TSPAN3O60637 253 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 MFAP3LO75121 409 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 RTN3O95197 1032 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 TBX18O95935 607 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 MT-CO3P00414 261 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 KRT9P35527 623 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 ZNF132P52740 706 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 YWHAEP62258 255 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 ENPP2Q13822 863 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 RAPGEF1Q13905 1077 aa14.45□□□□□ -0.1
SHKBP1-218ENST00000598907 ARHGAP44Q17R89 818 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms