RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ZNF135P52742 658 aaPredicted RBP22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 TMEM196Q5HYL7 178 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 ARTNQ5T4W7 220 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 RNF43Q68DV7 783 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 FSTL4Q6MZW2 842 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 PEX26Q7Z412 305 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 MAP7D3Q8IWC1 876 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 FOXQ1Q9C009 403 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 CATSPERBQ9H7T0 1116 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 LTB4R2Q9NPC1 389 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 DDX56Q9NY93 547 aaKnown RBP22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 CWC15Q9P013 229 aaKnown RBP22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 KIAA1522Q9P206 1035 aaPredicted RBP22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 AMFRQ9UKV5 643 aa22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.76■■□□□ 1.23
CHMP2A-204ENST00000597848 PSTPIP1O43586 416 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 KRT1P04264 644 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 DRD1P21728 446 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 HLA-FP30511 346 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 OR1E1P30953 314 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 CD70P32970 193 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 MESP2Q0VG99 397 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 PDK2Q15119 407 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 FSCBQ5H9T9 825 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 RFX8Q6ZV50 586 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 REXO1L1PQ8IX06 675 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 PHTF2Q8N3S3 785 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 ALS2CR12Q96Q35 445 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 CALN1Q9BXU9 219 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 GGA2Q9UJY4 613 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 SLC27A6Q9Y2P4 619 aa22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 MTF2Q9Y483 593 aaPredicted RBP22.75■■□□□ 1.23
CHMP2A-204ENST00000597848 COL4A3Q01955 1670 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 LRRD1A4D1F6 860 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 FGF10O15520 208 aaPredicted RBP22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 FTCDO95954 541 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 PDGFBP01127 241 aaPredicted RBP22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 EGFP01133 1207 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 RHOCP08134 193 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 PABPC1P11940 636 aaKnown RBP22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 TARSP26639 723 aaKnown RBP22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 HCAR3P49019 387 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 OXCT1P55809 520 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 LMAN2Q12907 356 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 C6orf118Q5T5N4 469 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 ANKS1BQ7Z6G8 1248 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 TERB1Q8NA31 727 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 RAPGEF5Q92565 580 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 RETREG1Q9H6L5 497 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 TMEM248Q9NWD8 314 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 DNAI1Q9UI46 699 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 NEU3Q9UQ49 428 aa22.74■■□□□ 1.23
CHMP2A-204ENST00000597848 F5P12259 2224 aa22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 CD48P09326 243 aa22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 KDELR1P24390 212 aa22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 HOXC13P31276 330 aa22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 ARSEP51690 589 aa22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 MMRN1Q13201 1228 aa22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 GEN1Q17RS7 908 aa22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 RNF219Q5W0B1 726 aaPredicted RBP22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 CXorf57Q6NSI4 855 aaKnown RBP22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 SETD3Q86TU7 594 aaPredicted RBP22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 NT5DC3Q86UY8 548 aa22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 NLRP14Q86W24 1093 aa22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 RTL3Q8N8U3 475 aaKnown RBP22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 RNF25Q96BH1 459 aaPredicted RBP22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 CSPG4P5Q96PW8 444 aa22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 LMAN1LQ9HAT1 526 aa22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 TBC1D30Q9Y2I9 924 aa22.73■■□□□ 1.23
CHMP2A-204ENST00000597848 BDP1A6H8Y1 2624 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 A0A0A0MRY4 1105 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 NCAM2O15394 837 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 ERCC2P18074 760 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 AMPD1P23109 780 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 CSKP41240 450 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 TNFRSF4P43489 277 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 MAPKAPK2P49137 400 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 SEC13P55735 322 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 DPYSL3Q14195 570 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 LRRC32Q14392 662 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 DGKKQ5KSL6 1271 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 SFTPA1Q8IWL2 248 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 AHI1Q8N157 1196 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 FAM71BQ8TC56 605 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 WFIKKN2Q8TEU8 576 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 KRT35Q92764 455 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 PBXIP1Q96AQ6 731 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 MUC3BQ9H195 1237 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 RBM12Q9NTZ6 932 aaKnown RBP22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 DONSONQ9NYP3 566 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 RCOR3Q9P2K3 495 aaPredicted RBP22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 SIT1Q9Y3P8 196 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 PCDHA3Q9Y5H8 950 aa22.72■■□□□ 1.23
CHMP2A-204ENST00000597848 CCDC66A2RUB6 948 aa22.71■■□□□ 1.23
CHMP2A-204ENST00000597848 PRRT4C9JH25 899 aa22.71■■□□□ 1.23
CHMP2A-204ENST00000597848 CTNNA2P26232 953 aa22.71■■□□□ 1.23
CHMP2A-204ENST00000597848 MZF1P28698 734 aaPredicted RBP22.71■■□□□ 1.23
CHMP2A-204ENST00000597848 CTNNA1P35221 906 aaKnown RBP22.71■■□□□ 1.23
CHMP2A-204ENST00000597848 MARCKSL1P49006 195 aa22.71■■□□□ 1.23
CHMP2A-204ENST00000597848 NUMBP49757 651 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms