RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 BST2Q10589 180 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 BNIP3Q12983 259 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 HNRNPA1L2Q32P51 320 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 INAVAQ3KP66 663 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 DPCR1Q3MIW9 517 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 ZSCAN23Q3MJ62 389 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 CBWD6Q4V339 395 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 PKDCCQ504Y2 493 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 CBWD3Q5JTY5 395 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 CBWD5Q5RIA9 395 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 MSANTD2Q6P1R3 559 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 MMS22LQ6ZRQ5 1243 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 DHX40Q8IX18 779 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 EID2Q8N6I1 236 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 FIBINQ8TAL6 211 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 KCTD13Q8WZ19 329 aa17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 PRICKLE1Q96MT3 831 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-215ENST00000597649 MAST4O15021 2626 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 TTC34A8MYJ7 566 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 PIK3R2O00459 728 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 ACSL4O60488 711 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 ITGAVP06756 1048 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 C1SP09871 688 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 LCP1P13796 627 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 STX17P56962 302 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 RPS24P62847 133 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 TYRO3Q06418 890 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 C19orf57Q0VDD7 668 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 CST6Q15828 149 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 EDRF1Q3B7T1 1238 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 SGO2Q562F6 1265 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 FSCBQ5H9T9 825 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 ANKRD40Q6AI12 368 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 FBXL19Q6PCT2 694 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 MMAAQ8IVH4 418 aaKnown RBP17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 SCML4Q8N228 414 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 OR2T34Q8NGX1 318 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 NXPE2Q96DL1 559 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 ADAMTS1Q9UHI8 967 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 SCML1Q9UN30 329 aa17.06■□□□□ 0.32
SHKBP1-215ENST00000597649 PLXNA2O75051 1894 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 O00370 1275 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 CETN3O15182 167 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 ATXN7O15265 892 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 RFPL3O75679 317 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 RNASEH2AO75792 299 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 ABCB4P21439 1286 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 CD38P28907 300 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 SLC8A1P32418 973 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 RGS7P49802 495 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 CUL2Q13617 745 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 ARID5BQ14865 1188 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 RTP5Q14D33 572 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 TPD52L1Q16890 204 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 CT47A1Q5JQC4 288 aaPredicted RBP17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 C6orf118Q5T5N4 469 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 HES3Q5TGS1 186 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 PMF1Q6P1K2 205 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 MFN1Q8IWA4 741 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 SIX6OS1Q8N1H7 587 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 AADATQ8N5Z0 425 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 UBR7Q8N806 425 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 CLEC4CQ8WTT0 213 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 TFAP2BQ92481 460 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 ZSWIM1Q9BR11 485 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 NAT10Q9H0A0 1025 aaKnown RBP17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 CNGB3Q9NQW8 809 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 AASDHPPTQ9NRN7 309 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 SLCO3A1Q9UIG8 710 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 RWDD2AQ9UIY3 292 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 AK5Q9Y6K8 562 aa17.05■□□□□ 0.32
SHKBP1-215ENST00000597649 TRIM49BA6NDI0 452 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 LRRC72A6NJI9 287 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 TK2O00142 265 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 TLR4O00206 839 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 IRAK2O43187 625 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 RNASEH1O60930 286 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 FGFR1OPO95684 399 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 FYNP06241 537 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 CD19P15391 556 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 ERCC5P28715 1186 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 EPHA8P29322 1005 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 SLC11A2P49281 568 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 CCR5P51681 352 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 NXPH1P58417 271 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 ST8SIA6P61647 398 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 FKBP3Q00688 224 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 KANSL1Q7Z3B3 1105 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 SPATS2Q86XZ4 545 aaKnown RBP17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 UNC45BQ8IWX7 931 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 SLC35F5Q8WV83 523 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 AZIN2Q96A70 460 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 COL26A1Q96A83 441 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 OMDQ99983 421 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 IRX2Q9BZI1 471 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 GDF3Q9NR23 364 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 HESX1Q9UBX0 185 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 ERVW-1Q9UQF0 538 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 COQ4Q9Y3A0 265 aa17.04■□□□□ 0.32
SHKBP1-215ENST00000597649 COL5A1P20908 1838 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms