RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 CYP3A43Q9HB55 503 aa11.32□□□□□ -0.6
ZNF548-207ENST00000597400 STIM2Q9P246 746 aa11.32□□□□□ -0.6
ZNF548-207ENST00000597400 ITIH6Q6UXX5 1313 aa11.32□□□□□ -0.6
ZNF548-207ENST00000597400 IKBKBO14920 756 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 CASC3O15234 703 aaKnown RBP11.31□□□□□ -0.6
ZNF548-207ENST00000597400 OPA1O60313 960 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 RTN2O75298 545 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 CSO75390 466 aaKnown RBP11.31□□□□□ -0.6
ZNF548-207ENST00000597400 GABBR2O75899 941 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 NR3C1P04150 777 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 GOT1P17174 413 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 MZF1P28698 734 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-207ENST00000597400 STK19P49842 368 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-207ENST00000597400 ZNF445P59923 1031 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 RPS24P62847 133 aaKnown RBP11.31□□□□□ -0.6
ZNF548-207ENST00000597400 SKOR1P84550 965 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 AMPD3Q01432 767 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 ZNF211Q13398 564 aaPredicted RBP11.31□□□□□ -0.6
ZNF548-207ENST00000597400 CUL4AQ13619 759 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 MPP7Q5T2T1 576 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 BSPRYQ5W0U4 402 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 ARHGAP17Q68EM7 881 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 SND1Q7KZF4 910 aaKnown RBP eCLIP11.31□□□□□ -0.6
ZNF548-207ENST00000597400 PRICKLE2Q7Z3G6 844 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 TMC6Q7Z403 805 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 MFN1Q8IWA4 741 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 OXR1Q8N573 874 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 OR4C6Q8NH72 309 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 FIBINQ8TAL6 211 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 SEMA4DQ92854 862 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 PTPRN2Q92932 1015 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 HEXIM2Q96MH2 286 aaKnown RBP11.31□□□□□ -0.6
ZNF548-207ENST00000597400 CYTH4Q9UIA0 394 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 SLCO3A1Q9UIG8 710 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 ERVW-1Q9UQF0 538 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 MTMR6Q9Y217 621 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 LRRK2Q5S007 2527 aa11.31□□□□□ -0.6
ZNF548-207ENST00000597400 TRPM6Q9BX84 2022 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 TBC1D3DA0A087WVF3 549 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 TBC1D3IA0A087WXS9 549 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 TBC1D3EA0A087X179 549 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 TBC1D3KA0A087X1G2 549 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 TBC1D3FA6NER0 549 aaPredicted RBP11.3□□□□□ -0.6
ZNF548-207ENST00000597400 TBC1D3LB9A6J9 549 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 K7ENP7 123 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 POLR2DO15514 142 aaKnown RBP11.3□□□□□ -0.6
ZNF548-207ENST00000597400 FFAR2O15552 330 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 RNASEH1O60930 286 aaKnown RBP11.3□□□□□ -0.6
ZNF548-207ENST00000597400 SLFN14P0C7P3 912 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 TBC1D3HP0C7X1 549 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 TRIM21P19474 475 aaKnown RBP11.3□□□□□ -0.6
ZNF548-207ENST00000597400 DGKAP23743 735 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 AFMP43652 599 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 LSSP48449 732 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 ERVPABLB-1P60509 514 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 ST8SIA6P61647 398 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 DAB2P98082 770 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 STK38Q15208 465 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 GOLGA7BQ2TAP0 167 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 POM121L1PQ3SYA9 428 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 PITRM1Q5JRX3 1037 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 CEP135Q66GS9 1140 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 TBC1D3GQ6DHY5 549 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 TBC1D3CQ6IPX1 549 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 INO80CQ6PI98 192 aaPredicted RBP11.3□□□□□ -0.6
ZNF548-207ENST00000597400 TBC1D3Q8IZP1 549 aaPredicted RBP11.3□□□□□ -0.6
ZNF548-207ENST00000597400 APCDD1Q8J025 514 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 IQUBQ8NA54 791 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 ANKRD52Q8NB46 1076 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 GOLGA5Q8TBA6 731 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 PRR11Q96HE9 360 aaPredicted RBP11.3□□□□□ -0.6
ZNF548-207ENST00000597400 RPL10LQ96L21 214 aaKnown RBP11.3□□□□□ -0.6
ZNF548-207ENST00000597400 UBXN6Q9BZV1 441 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 MMRN2Q9H8L6 949 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 POLR1BQ9H9Y6 1135 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 CISHQ9NSE2 258 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 OLA1Q9NTK5 396 aaKnown RBP11.3□□□□□ -0.6
ZNF548-207ENST00000597400 PPP4R2Q9NY27 417 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 TSPAN16Q9UKR8 245 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 SARDHQ9UL12 918 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 SATB2Q9UPW6 733 aa11.3□□□□□ -0.6
ZNF548-207ENST00000597400 EDDM13A0A1B0GTR0 161 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 PVALEFA0A1B0GWK0 134 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 TARSL2A2RTX5 802 aaKnown RBP11.29□□□□□ -0.6
ZNF548-207ENST00000597400 XPO1O14980 1071 aaKnown RBP11.29□□□□□ -0.6
ZNF548-207ENST00000597400 SPTLC2O15270 562 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 PLRG1O43660 514 aaKnown RBP11.29□□□□□ -0.6
ZNF548-207ENST00000597400 ACSL4O60488 711 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 ADH1BP00325 375 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 IL1BP01584 269 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 ASLP04424 464 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 CKMT1AP12532 417 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 C5AR1P21730 350 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 CSRP3P50461 194 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 VAMP7P51809 220 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 DAOAP59103 153 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 NFKB2Q00653 900 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 E2F1Q01094 437 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 SLC45A4Q5BKX6 768 aa11.29□□□□□ -0.6
ZNF548-207ENST00000597400 C3orf38Q5JPI3 329 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms