RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
LIG1-211ENST00000596457 FNDC3BQ53EP0 1204 aaKnown RBP11.43□□□□□ -0.58
LIG1-211ENST00000596457 TMEM215Q68D42 235 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 TMEM92Q6UXU6 159 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 DGLUCYQ7Z3D6 616 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 BNIPLQ7Z465 357 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 SLFN11Q7Z7L1 901 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 AHI1Q8N157 1196 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 SPC24Q8NBT2 197 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 WFIKKN2Q8TEU8 576 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 CENPIQ92674 756 aaPredicted RBP11.43□□□□□ -0.58
LIG1-211ENST00000596457 NELL1Q92832 810 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 ARHGEF26Q96DR7 871 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 BTBD6Q96KE9 485 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 HAPLN3Q96S86 360 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 NUP85Q9BW27 656 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 TPSD1Q9BZJ3 242 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 POLMQ9NP87 494 aaPredicted RBP11.43□□□□□ -0.58
LIG1-211ENST00000596457 SPTLC3Q9NUV7 552 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 TMEM51Q9NW97 253 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 MPP6Q9NZW5 540 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 KIAA1522Q9P206 1035 aaPredicted RBP11.43□□□□□ -0.58
LIG1-211ENST00000596457 BCCIPQ9P287 314 aaKnown RBP eCLIP11.43□□□□□ -0.58
LIG1-211ENST00000596457 INVSQ9Y283 1065 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 STARD13Q9Y3M8 1113 aa11.43□□□□□ -0.58
LIG1-211ENST00000596457 F5P12259 2224 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 A0A1B0GVM2 712 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 SSU72P8A0A1W2PR75 194 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 TCRBV21S2A2A0A5A6 115 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 TCAF2A6NFQ2 919 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 ADAM23O75077 832 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 RNF8O76064 485 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 ATP5BP06576 529 aaKnown RBP11.42□□□□□ -0.58
LIG1-211ENST00000596457 HLA-EP13747 358 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 HNRNPLP14866 589 aaKnown RBP eCLIP11.42□□□□□ -0.58
LIG1-211ENST00000596457 MZF1P28698 734 aaPredicted RBP11.42□□□□□ -0.58
LIG1-211ENST00000596457 CSKP41240 450 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 IL12RB1P42701 662 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 SSR1P43307 286 aaKnown RBP11.42□□□□□ -0.58
LIG1-211ENST00000596457 CDH4P55283 916 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 ZNF234Q14588 700 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 CRY1Q16526 586 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 SLC18A3Q16572 532 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 FUT11Q495W5 492 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 ALFQ53S48 1182 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 PITRM1Q5JRX3 1037 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 TTC39BQ5VTQ0 682 aaPredicted RBP11.42□□□□□ -0.58
LIG1-211ENST00000596457 RNF219Q5W0B1 726 aaPredicted RBP11.42□□□□□ -0.58
LIG1-211ENST00000596457 ANO7Q6IWH7 933 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 RWDD4Q6NW29 188 aaKnown RBP11.42□□□□□ -0.58
LIG1-211ENST00000596457 TFAP2DQ7Z6R9 452 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 ADIPOR2Q86V24 386 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 APCDD1Q8J025 514 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 PYROXD2Q8N2H3 581 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 ZNF366Q8N895 744 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 ZNF557Q8N988 423 aaPredicted RBP11.42□□□□□ -0.58
LIG1-211ENST00000596457 TC2NQ8N9U0 490 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 ZBTB44Q8NCP5 570 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 HMGB4Q8WW32 186 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 C1orf74Q96LT6 269 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 PACSIN1Q9BY11 444 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 MUC3BQ9H195 1237 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 GPATCH2LQ9NWQ4 482 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 CTTNBP2NLQ9P2B4 639 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 THAP10Q9P2Z0 257 aaPredicted RBP11.42□□□□□ -0.58
LIG1-211ENST00000596457 OR12D3Q9UGF7 316 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 ANAPC7Q9UJX3 599 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 RALYQ9UKM9 306 aaKnown RBP11.42□□□□□ -0.58
LIG1-211ENST00000596457 PLA2G4CQ9UP65 541 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 STON1Q9Y6Q2 735 aa11.42□□□□□ -0.58
LIG1-211ENST00000596457 ANKRD11Q6UB99 2663 aaPredicted RBP11.42□□□□□ -0.58
LIG1-211ENST00000596457 TMEM110-MUSTN1A8MSY1 372 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 FAM72CH0Y354 149 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 ZBTB24O43167 697 aaPredicted RBP11.41□□□□□ -0.58
LIG1-211ENST00000596457 TIMM44O43615 452 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 CREB3O43889 395 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 LILRB5O75023 590 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 CLDN11O75508 207 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 ALDH1A2O94788 518 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 PAPSS2O95340 614 aaPredicted RBP11.41□□□□□ -0.58
LIG1-211ENST00000596457 APBB3O95704 486 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 CYP1A2P05177 515 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 EPHX1P07099 455 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 RHOCP08134 193 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 H2AFZP0C0S5 128 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 TDGF1P13385 188 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 CTSOP43234 321 aaPredicted RBP11.41□□□□□ -0.58
LIG1-211ENST00000596457 ZNF252P-AS1Q0IIN9 211 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 SRSF5Q13243 272 aaKnown RBP11.41□□□□□ -0.58
LIG1-211ENST00000596457 EIF4HQ15056 248 aaKnown RBP11.41□□□□□ -0.58
LIG1-211ENST00000596457 ASTE1Q2TB18 679 aaPredicted RBP11.41□□□□□ -0.58
LIG1-211ENST00000596457 HSF5Q4G112 596 aaPredicted RBP11.41□□□□□ -0.58
LIG1-211ENST00000596457 EFHC2Q5JST6 749 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 FAM72AQ5TYM5 149 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 DAB2IPQ5VWQ8 1189 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 FAM72DQ6L9T8 149 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 SERPINA13PQ6UXR4 307 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 PRR23BQ6ZRT6 265 aa11.41□□□□□ -0.58
LIG1-211ENST00000596457 H2AFVQ71UI9 128 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms