RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 TRAFD1O14545 582 aaPredicted RBP23.26■■□□□ 1.31
SRRM1-222ENST00000596378 DNAJC6O75061 913 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 ANP32DO95626 131 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 CCND1P24385 295 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 CNTFP26441 200 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 AIF1P55008 147 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 RPL10AP62906 217 aaKnown RBP23.26■■□□□ 1.31
SRRM1-222ENST00000596378 TRIM42Q8IWZ5 723 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 TRIB2Q92519 343 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 PGAP3Q96FM1 320 aaPredicted RBP23.26■■□□□ 1.31
SRRM1-222ENST00000596378 UBP1Q9NZI7 540 aa23.26■■□□□ 1.31
SRRM1-222ENST00000596378 LRIG2O94898 1065 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 POLBP06746 335 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 PCSK1P29120 753 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 ARL13BQ3SXY8 428 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 ZNF669Q96BR6 464 aaPredicted RBP23.25■■□□□ 1.31
SRRM1-222ENST00000596378 CERS2Q96G23 380 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 MLPHQ9BV36 600 aaPredicted RBP23.25■■□□□ 1.31
SRRM1-222ENST00000596378 NKX1-2Q9UD57 310 aaPredicted RBP23.25■■□□□ 1.31
SRRM1-222ENST00000596378 LYPLA1O75608 230 aaPredicted RBP23.25■■□□□ 1.31
SRRM1-222ENST00000596378 AP2A1O95782 977 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 CYBAP13498 195 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 KCNA4P22459 653 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 PDE1BQ01064 536 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 FASTKD1Q53R41 847 aaKnown RBP23.25■■□□□ 1.31
SRRM1-222ENST00000596378 PDZD4Q76G19 769 aaPredicted RBP23.25■■□□□ 1.31
SRRM1-222ENST00000596378 LRRTM3Q86VH5 581 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 DNAAF3Q8N9W5 541 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 SCAMP5Q8TAC9 235 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 AZIN2Q96A70 460 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 CSNK1G1Q9HCP0 422 aa23.25■■□□□ 1.31
SRRM1-222ENST00000596378 ITGB1P05556 798 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 ODC1P11926 461 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 NFKB1P19838 968 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 ABCG1P45844 678 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 CXCR3P49682 368 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 CERCAMQ5T4B2 595 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 CCNJLQ8IV13 435 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 OR10T2Q8NGX3 314 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 RNF34Q969K3 372 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 CADM1Q9BY67 442 aaKnown RBP23.24■■□□□ 1.31
SRRM1-222ENST00000596378 EBF2Q9HAK2 575 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 VANGL2Q9ULK5 521 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 GABRQQ9UN88 632 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 GPR182O15218 404 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 SNNO75324 88 aaPredicted RBP23.24■■□□□ 1.31
SRRM1-222ENST00000596378 YY1P25490 414 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 RPL9P32969 192 aaKnown RBP23.24■■□□□ 1.31
SRRM1-222ENST00000596378 AQP5P55064 265 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 RFWD3Q6PCD5 774 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 CD300LGQ6UXG3 332 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 CCDC91Q7Z6B0 441 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 CMC1Q7Z7K0 106 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 NSL1Q96IY1 281 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 AGAP2Q99490 1192 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 MCM8Q9UJA3 840 aa23.24■■□□□ 1.31
SRRM1-222ENST00000596378 TDRD15B5MCY1 1934 aaKnown RBP23.24■■□□□ 1.31
SRRM1-222ENST00000596378 ATP9BO43861 1147 aa23.23■■□□□ 1.31
SRRM1-222ENST00000596378 SRGAP2BP0DMP2 458 aa23.23■■□□□ 1.31
SRRM1-222ENST00000596378 GARSP41250 739 aaKnown RBP23.23■■□□□ 1.31
SRRM1-222ENST00000596378 HCAR3P49019 387 aa23.23■■□□□ 1.31
SRRM1-222ENST00000596378 STX3Q13277 289 aa23.23■■□□□ 1.31
SRRM1-222ENST00000596378 INTS6LQ5JSJ4 861 aaKnown RBP23.23■■□□□ 1.31
SRRM1-222ENST00000596378 RINLQ6ZS11 566 aa23.23■■□□□ 1.31
SRRM1-222ENST00000596378 EPAS1Q99814 870 aa23.23■■□□□ 1.31
SRRM1-222ENST00000596378 NAT9Q9BTE0 207 aa23.23■■□□□ 1.31
SRRM1-222ENST00000596378 ZFYVE28Q9HCC9 887 aa23.23■■□□□ 1.31
SRRM1-222ENST00000596378 NMRK2Q9NPI5 230 aa23.23■■□□□ 1.31
SRRM1-222ENST00000596378 ZNF358Q9NW07 568 aa23.23■■□□□ 1.31
SRRM1-222ENST00000596378 KCNK4Q9NYG8 393 aa23.23■■□□□ 1.31
SRRM1-222ENST00000596378 HBS1LQ9Y450 684 aaKnown RBP23.23■■□□□ 1.31
SRRM1-222ENST00000596378 BIRC5O15392 142 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 ITM2AO43736 263 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 KPNA6O60684 536 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 TPH1P17752 444 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 GALNT2Q10471 571 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 MRPL10Q7Z7H8 261 aaKnown RBP23.22■■□□□ 1.31
SRRM1-222ENST00000596378 CRLF3Q8IUI8 442 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 PPP1R14CQ8TAE6 165 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 TTC8Q8TAM2 541 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 DQX1Q8TE96 717 aaKnown RBP23.22■■□□□ 1.31
SRRM1-222ENST00000596378 USP33Q8TEY7 942 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 HDAC11Q96DB2 347 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 MFSD3Q96ES6 412 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 TACO1Q9BSH4 297 aaKnown RBP23.22■■□□□ 1.31
SRRM1-222ENST00000596378 SIK2Q9H0K1 926 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 GBA3Q9H227 469 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 TXNDC16Q9P2K2 825 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 PEX11AO75192 247 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 PRKCGP05129 697 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 RPSAP08865 295 aaKnown RBP23.22■■□□□ 1.31
SRRM1-222ENST00000596378 CPA2P48052 419 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 SPANXN3Q5MJ09 141 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 MBLAC2Q68D91 279 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 KCTD11Q693B1 232 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 FAM171BQ6P995 826 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 KYAT3Q6YP21 454 aaKnown RBP23.22■■□□□ 1.31
SRRM1-222ENST00000596378 ARHGAP36Q6ZRI8 547 aa23.22■■□□□ 1.31
SRRM1-222ENST00000596378 DENND2DQ9H6A0 471 aaPredicted RBP23.22■■□□□ 1.31
SRRM1-222ENST00000596378 TLE6Q9H808 572 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms