RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 EOGTQ5NDL2 527 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 TTC39BQ5VTQ0 682 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 KIAA1211LQ6NV74 962 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 LRRC31Q6UY01 552 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 TFAP2DQ7Z6R9 452 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 SLFN11Q7Z7L1 901 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 CPNE8Q86YQ8 564 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 ZNF366Q8N895 744 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 NELL1Q92832 810 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 NTAN1Q96AB6 310 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 CCDC42Q96M95 316 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 MRPL47Q9HD33 250 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 KIAA1522Q9P206 1035 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 THAP10Q9P2Z0 257 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 OR12D3Q9UGF7 316 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 PCSK1NQ9UHG2 260 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 ANAPC7Q9UJX3 599 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 FZD10Q9ULW2 581 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 NEU3Q9UQ49 428 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 STON1Q9Y6Q2 735 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 SPAG17Q6Q759 2223 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 THADAQ6YHU6 1953 aa14.2□□□□□ -0.14
SHKBP1-207ENST00000595631 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 A0A1W2PQF6 199 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 DRGXA6NNA5 263 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 H2AFZP0C0S5 128 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 HLA-EP13747 358 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 POLR2EP19388 210 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 MIPP30301 263 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 CDH4P55283 916 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 SCAPQ12770 1279 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 ZNF177Q13360 481 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 EIF4HQ15056 248 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 CA9Q16790 459 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 PTPRNQ16849 979 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 HSF5Q4G112 596 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 MANEALQ5VSG8 457 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 ANO7Q6IWH7 933 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 CYP4V2Q6ZWL3 525 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 H2AFVQ71UI9 128 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 TRMT11Q7Z4G4 463 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 CCDC117Q8IWD4 279 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 TSTD1Q8NFU3 115 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 KCNV2Q8TDN2 545 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 FNIP1Q8TF40 1166 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 UCMAQ8WVF2 138 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 CTNNBL1Q8WYA6 563 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 GABRG3Q99928 467 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 TPSD1Q9BZJ3 242 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 OSBPL2Q9H1P3 480 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 SLC6A17Q9H1V8 727 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 MTG2Q9H4K7 406 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 TMEM51Q9NW97 253 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 ZSCAN32Q9NX65 697 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 ZNF212Q9UDV6 495 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 CACNA1HO95180 2353 aa14.19□□□□□ -0.14
SHKBP1-207ENST00000595631 SHROOM3Q8TF72 1996 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 TCRBV21S2A2A0A5A6 115 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 SOWAHDA6NJG2 315 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 LRCH4O75427 683 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 CLDN11O75508 207 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 RNF8O76064 485 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 LRIG2O94898 1065 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 APBB3O95704 486 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 CDC25BP30305 580 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 STK19P49842 368 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 PLEKHG6Q3KR16 790 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 FNDC3BQ53EP0 1204 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 EFHC2Q5JST6 749 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 RNF219Q5W0B1 726 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 RWDD4Q6NW29 188 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 ZNF557Q8N988 423 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 ZBTB44Q8NCP5 570 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 MDGA1Q8NFP4 955 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 ZNF564Q8TBZ8 553 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 TTC17Q96AE7 1141 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 ALG14Q96F25 216 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 MYO19Q96H55 970 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 SNRNP25Q9BV90 132 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 ZYG11BQ9C0D3 744 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 CD248Q9HCU0 757 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 OSGEPQ9NPF4 335 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 NDFIP2Q9NV92 336 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 CTTNBP2NLQ9P2B4 639 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 TFR2Q9UP52 801 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 AP4E1Q9UPM8 1137 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 TBC1D30Q9Y2I9 924 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 ARIH1Q9Y4X5 557 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 RALGAPA1Q6GYQ0 2036 aa14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 TNRC6BQ9UPQ9 1833 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-207ENST00000595631 A0A0D9SEW6 157 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 TIMM44O43615 452 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 CREB3O43889 395 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 RHOCP08134 193 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 TMEM253P0C7T8 217 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 DESP17661 470 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 IL1R2P27930 398 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 DGKEP52429 567 aa14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 NRG1Q02297 640 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-207ENST00000595631 ENPP2Q13822 863 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms