RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 FSCBQ5H9T9 825 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 KCNT1Q5JUK3 1230 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 SYPL2Q5VXT5 272 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 MMS22LQ6ZRQ5 1243 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 MARCH9Q86YJ5 346 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 MFN1Q8IWA4 741 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 UNC45BQ8IWX7 931 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 CARNMT1Q8N4J0 409 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 ADAMTS14Q8WXS8 1223 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 IRGQQ8WZA9 623 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 BIRC7Q96CA5 298 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 MYO19Q96H55 970 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 FCRL2Q96LA5 508 aaPredicted RBP12.94□□□□□ -0.34
UPF1-203ENST00000594504 HSFY1Q96LI6 401 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 SPAG5Q96R06 1193 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 BTBD1Q9H0C5 482 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 NUCKS1Q9H1E3 243 aaKnown RBP12.94□□□□□ -0.34
UPF1-203ENST00000594504 SUN2Q9UH99 717 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 XPO7Q9UIA9 1087 aaKnown RBP12.94□□□□□ -0.34
UPF1-203ENST00000594504 PCDHGC3Q9UN70 934 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 BTBD3Q9Y2F9 522 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.94□□□□□ -0.34
UPF1-203ENST00000594504 ZFHX4Q86UP3 3567 aa12.94□□□□□ -0.34
UPF1-203ENST00000594504 PTPRBP23467 1997 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 A0A1W2PQC6 194 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 FAM47DPA6NHR8 397 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 TEX33O43247 280 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 SEMA4FO95754 770 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 CER1O95813 267 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 MOCS2O96007 188 aaPredicted RBP12.93□□□□□ -0.34
UPF1-203ENST00000594504 DNTTP04053 509 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 ATP5BP06576 529 aaKnown RBP12.93□□□□□ -0.34
UPF1-203ENST00000594504 ATXN1LP0C7T5 689 aaKnown RBP12.93□□□□□ -0.34
UPF1-203ENST00000594504 KRT9P35527 623 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 JAM2P57087 298 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 ZNF445P59923 1031 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 FANCCQ00597 558 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 RING1Q06587 406 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 SCAPQ12770 1279 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 NUGGCQ68CJ6 796 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 DENND1BQ6P3S1 775 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 DBX2Q6ZNG2 339 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 SLC47A2Q86VL8 602 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 FIBINQ8TAL6 211 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 DQX1Q8TE96 717 aaKnown RBP12.93□□□□□ -0.34
UPF1-203ENST00000594504 RHBDD1Q8TEB9 315 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 STK32AQ8WU08 396 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 MRGPRX3Q96LB0 322 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 NAP1L5Q96NT1 182 aaPredicted RBP12.93□□□□□ -0.34
UPF1-203ENST00000594504 TM9SF3Q9HD45 589 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 NLRC4Q9NPP4 1024 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 ST7Q9NRC1 585 aa12.93□□□□□ -0.34
UPF1-203ENST00000594504 PLXNA2O75051 1894 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 SIN3BO75182 1162 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 FBXO21O94952 628 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 CYP11B1P15538 503 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 SOX5P35711 763 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 CSKP41240 450 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 STAT1P42224 750 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 ACADSBP45954 432 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 RPL34P49207 117 aaKnown RBP12.92□□□□□ -0.34
UPF1-203ENST00000594504 PITX1P78337 314 aaPredicted RBP12.92□□□□□ -0.34
UPF1-203ENST00000594504 IL9RQ01113 521 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 NR1I3Q14994 352 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 DCAF6Q58WW2 860 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 MS4A13Q5J8X5 152 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 PRAMEF14Q5SWL7 426 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 MPP7Q5T2T1 576 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 ZNF776Q68DI1 518 aaPredicted RBP12.92□□□□□ -0.34
UPF1-203ENST00000594504 IL27RAQ6UWB1 636 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 APCDD1Q8J025 514 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 GANCQ8TET4 914 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 GOLGA1Q92805 767 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 AZIN2Q96A70 460 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 TTC17Q96AE7 1141 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 FAM149B1Q96BN6 582 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 SLC39A13Q96H72 371 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 ORAI3Q9BRQ5 295 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 EBF2Q9HAK2 575 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 TOR4AQ9NXH8 423 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 SERGEFQ9UGK8 458 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 CYTH4Q9UIA0 394 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 APOBEC2Q9Y235 224 aaKnown RBP12.92□□□□□ -0.34
UPF1-203ENST00000594504 ANKRD6Q9Y2G4 727 aa12.92□□□□□ -0.34
UPF1-203ENST00000594504 A0A1W2PP55 124 aa12.91□□□□□ -0.34
UPF1-203ENST00000594504 TTC34A8MYJ7 566 aa12.91□□□□□ -0.34
UPF1-203ENST00000594504 H0Y8X5 98 aa12.91□□□□□ -0.34
UPF1-203ENST00000594504 MID1O15344 667 aa12.91□□□□□ -0.34
UPF1-203ENST00000594504 IRAK2O43187 625 aa12.91□□□□□ -0.34
UPF1-203ENST00000594504 GFPT2O94808 682 aa12.91□□□□□ -0.34
UPF1-203ENST00000594504 ZNF883P0CG24 379 aa12.91□□□□□ -0.34
UPF1-203ENST00000594504 C7P10643 843 aa12.91□□□□□ -0.34
UPF1-203ENST00000594504 AFF3P51826 1226 aaKnown RBP12.91□□□□□ -0.34
UPF1-203ENST00000594504 UBASH3AP57075 661 aa12.91□□□□□ -0.34
UPF1-203ENST00000594504 ZC3H12AQ5D1E8 599 aaKnown RBP12.91□□□□□ -0.34
UPF1-203ENST00000594504 C9orf64Q5T6V5 341 aa12.91□□□□□ -0.34
UPF1-203ENST00000594504 RAP1GAP2Q684P5 730 aa12.91□□□□□ -0.34
UPF1-203ENST00000594504 C19orf48Q6RUI8 117 aa12.91□□□□□ -0.34
UPF1-203ENST00000594504 CCNI2Q6ZMN8 369 aaPredicted RBP12.91□□□□□ -0.34
UPF1-203ENST00000594504 GLRX5Q86SX6 157 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms