RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CCDC170Q8IYT3 715 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 COG1Q8WTW3 980 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 SLC27A6Q9Y2P4 619 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 HS3ST4Q9Y661 456 aa20.25■□□□□ 0.83
LSM4-203ENST00000593829 TMEM191CA6NGB0 347 aa20.24■□□□□ 0.83
LSM4-203ENST00000593829 GALR2O43603 387 aaPredicted RBP20.24■□□□□ 0.83
LSM4-203ENST00000593829 RPS24P62847 133 aaKnown RBP20.24■□□□□ 0.83
LSM4-203ENST00000593829 ACBD5Q5T8D3 534 aaPredicted RBP20.24■□□□□ 0.83
LSM4-203ENST00000593829 C1orf210Q8IVY1 113 aa20.24■□□□□ 0.83
LSM4-203ENST00000593829 C10orf67Q8IYJ2 551 aa20.24■□□□□ 0.83
LSM4-203ENST00000593829 SIK2Q9H0K1 926 aa20.24■□□□□ 0.83
LSM4-203ENST00000593829 THAP2Q9H0W7 228 aa20.24■□□□□ 0.83
LSM4-203ENST00000593829 ANLNQ9NQW6 1124 aa20.24■□□□□ 0.83
LSM4-203ENST00000593829 CLEC4EQ9ULY5 219 aa20.24■□□□□ 0.83
LSM4-203ENST00000593829 KIAA1549LQ6ZVL6 1849 aa20.24■□□□□ 0.83
LSM4-203ENST00000593829 KRT86O43790 486 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 CYLC1P35663 651 aaPredicted RBP20.23■□□□□ 0.83
LSM4-203ENST00000593829 HDAC4P56524 1084 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 AUHQ13825 339 aaKnown RBP20.23■□□□□ 0.83
LSM4-203ENST00000593829 GAS6Q14393 721 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 RAB6CQ53S08 254 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 RNF43Q68DV7 783 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 MAMSTRQ6ZN01 415 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 SFTPA1Q8IWL2 248 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 SPEM1Q8N4L4 309 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 MYEOVQ96EZ4 313 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 RAB6CQ9H0N0 254 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 STIM2Q9P246 746 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 GUCA1BQ9UMX6 200 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 HCN4Q9Y3Q4 1203 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 ZNF318Q5VUA4 2279 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 EIF3CLB5ME19 914 aaKnown RBP20.23■□□□□ 0.83
LSM4-203ENST00000593829 I6L893 689 aaPredicted RBP20.23■□□□□ 0.83
LSM4-203ENST00000593829 ATG13O75143 517 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 GALCP54803 685 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 SEC13P55735 322 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 ARL13BQ3SXY8 428 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 RABGAP1LQ5R372 815 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 C10orf76Q5T2E6 689 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 FBXL22Q6P050 247 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 ZNF572Q7Z3I7 529 aaPredicted RBP20.23■□□□□ 0.83
LSM4-203ENST00000593829 CFAP52Q8N1V2 620 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 ZNF557Q8N988 423 aaPredicted RBP20.23■□□□□ 0.83
LSM4-203ENST00000593829 FNIP1Q8TF40 1166 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 C1orf74Q96LT6 269 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 HAPLN3Q96S86 360 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 EIF3CQ99613 913 aaKnown RBP20.23■□□□□ 0.83
LSM4-203ENST00000593829 KCNH6Q9H252 994 aa20.23■□□□□ 0.83
LSM4-203ENST00000593829 SHOX2O60902 331 aaPredicted RBP20.22■□□□□ 0.83
LSM4-203ENST00000593829 PSMA2P25787 234 aa20.22■□□□□ 0.83
LSM4-203ENST00000593829 CORO7P57737 925 aa20.22■□□□□ 0.83
LSM4-203ENST00000593829 OGDHQ02218 1023 aa20.22■□□□□ 0.83
LSM4-203ENST00000593829 TTC39BQ5VTQ0 682 aaPredicted RBP20.22■□□□□ 0.83
LSM4-203ENST00000593829 CCDC117Q8IWD4 279 aaPredicted RBP20.22■□□□□ 0.83
LSM4-203ENST00000593829 TMPRSS4Q9NRS4 437 aa20.22■□□□□ 0.83
LSM4-203ENST00000593829 RSPH14Q9UHP6 348 aa20.22■□□□□ 0.83
LSM4-203ENST00000593829 VANGL2Q9ULK5 521 aa20.22■□□□□ 0.83
LSM4-203ENST00000593829 CHURC1-FNTBB4DL54 471 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 LAMTOR5O43504 91 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 ATP1A1P05023 1023 aaKnown RBP20.21■□□□□ 0.83
LSM4-203ENST00000593829 CYP1A2P05177 515 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 ADRA1BP35368 520 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 C2orf27AQ580R0 203 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 ANKS1BQ7Z6G8 1248 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 MFN1Q8IWA4 741 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 RPLP0P6Q8NHW5 317 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 USP33Q8TEY7 942 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 RPRD1AQ96P16 312 aaPredicted RBP20.21■□□□□ 0.83
LSM4-203ENST00000593829 CCR3P51677 355 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 MRPS21P82921 87 aaKnown RBP20.21■□□□□ 0.83
LSM4-203ENST00000593829 C14orf80Q86SX3 495 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 CARNMT1Q8N4J0 409 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 FIBINQ8TAL6 211 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 KCNV2Q8TDN2 545 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 TRIM7Q9C029 511 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 TRIM10Q9UDY6 481 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 STARD13Q9Y3M8 1113 aa20.21■□□□□ 0.83
LSM4-203ENST00000593829 PRRT4C9JH25 899 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 LUC7L3O95232 432 aaKnown RBP20.2■□□□□ 0.82
LSM4-203ENST00000593829 H2AFZP0C0S5 128 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 HLA-FP30511 346 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 GGCXP38435 758 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 KIR2DL1P43626 348 aaPredicted RBP20.2■□□□□ 0.82
LSM4-203ENST00000593829 NOP2P46087 812 aaKnown RBP20.2■□□□□ 0.82
LSM4-203ENST00000593829 CDH18Q13634 790 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 ANGPT1Q15389 498 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 EMC10Q5UCC4 262 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 SCYL2Q6P3W7 929 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 PKN3Q6P5Z2 889 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 CCNI2Q6ZMN8 369 aaPredicted RBP20.2■□□□□ 0.82
LSM4-203ENST00000593829 H2AFVQ71UI9 128 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 CTNNBL1Q8WYA6 563 aaPredicted RBP20.2■□□□□ 0.82
LSM4-203ENST00000593829 IGSF8Q969P0 613 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 NTAN1Q96AB6 310 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 ARHGEF26Q96DR7 871 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 NUP85Q9BW27 656 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 TSGA10Q9BZW7 698 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 FAM107BQ9H098 131 aa20.2■□□□□ 0.82
LSM4-203ENST00000593829 CPP00450 1065 aa20.19■□□□□ 0.82
LSM4-203ENST00000593829 PRLRP16471 622 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms