RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 SOWAHCQ53LP3 525 aaPredicted RBP16.93■□□□□ 0.3
LIG1-205ENST00000593425 DHRS13Q6UX07 377 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 APCDD1Q8J025 514 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 AADATQ8N5Z0 425 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 KDM1BQ8NB78 822 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 FAM149B1Q96BN6 582 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 CEP63Q96MT8 703 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 KREMEN1Q96MU8 473 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 ST7Q9NRC1 585 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 ADAMTS1Q9UHI8 967 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 SLCO3A1Q9UIG8 710 aa16.93■□□□□ 0.3
LIG1-205ENST00000593425 TARSL2A2RTX5 802 aaKnown RBP16.92■□□□□ 0.3
LIG1-205ENST00000593425 CBX4O00257 560 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 SRPRAP08240 638 aaKnown RBP16.92■□□□□ 0.3
LIG1-205ENST00000593425 SLC8A1P32418 973 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 PSMD8P48556 350 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 GCNT1Q02742 428 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 SHBQ15464 509 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 RAP1GAP2Q684P5 730 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 TTI2Q6NXR4 508 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 DENND1BQ6P3S1 775 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 LGI2Q8N0V4 545 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 OR2T34Q8NGX1 318 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 DHTKD1Q96HY7 919 aaPredicted RBP16.92■□□□□ 0.3
LIG1-205ENST00000593425 RPL10LQ96L21 214 aaKnown RBP16.92■□□□□ 0.3
LIG1-205ENST00000593425 FAM129BQ96TA1 746 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 ELF4Q99607 663 aaPredicted RBP16.92■□□□□ 0.3
LIG1-205ENST00000593425 OMDQ99983 421 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 FTSJ1Q9UET6 329 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 MAN1B1Q9UKM7 699 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 FZD4Q9ULV1 537 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 DSPP15924 2871 aaKnown RBP16.92■□□□□ 0.3
LIG1-205ENST00000593425 CABIN1Q9Y6J0 2220 aa16.92■□□□□ 0.3
LIG1-205ENST00000593425 EDDM13A0A1B0GTR0 161 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 A0A1W2PR77 199 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 LRRC72A6NJI9 287 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 P4HA2O15460 535 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 STK19P49842 368 aaPredicted RBP16.91■□□□□ 0.3
LIG1-205ENST00000593425 ADPRHP54922 357 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 CLDN6P56747 220 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 PITX1P78337 314 aaPredicted RBP16.91■□□□□ 0.3
LIG1-205ENST00000593425 ECT2LQ008S8 904 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 INAVAQ3KP66 663 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 ZC3H12AQ5D1E8 599 aaKnown RBP16.91■□□□□ 0.3
LIG1-205ENST00000593425 KLHL10Q6JEL2 608 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 CHSY1Q86X52 802 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 CCDC117Q8IWD4 279 aaPredicted RBP16.91■□□□□ 0.3
LIG1-205ENST00000593425 STK40Q8N2I9 435 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 PTPRN2Q92932 1015 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 SCUBE2Q9NQ36 999 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 AASDHPPTQ9NRN7 309 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 CYTH4Q9UIA0 394 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 CEP83Q9Y592 693 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 KNL1Q8NG31 2342 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 CELSR3Q9NYQ7 3312 aa16.91■□□□□ 0.3
LIG1-205ENST00000593425 E5RJQ4 531 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 SART1O43290 800 aaKnown RBP16.9■□□□□ 0.3
LIG1-205ENST00000593425 DFNA5O60443 496 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 MOCS3O95396 460 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 IGLV3-25P01717 112 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 APOEP02649 317 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 VAV1P15498 845 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 TACR2P21452 398 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 BMP6P22004 513 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 CD38P28907 300 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 PPP2CBP62714 309 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 PPP2CAP67775 309 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 SFSWAPQ12872 951 aaKnown RBP16.9■□□□□ 0.3
LIG1-205ENST00000593425 STIM1Q13586 685 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 SND1Q7KZF4 910 aaKnown RBP eCLIP16.9■□□□□ 0.3
LIG1-205ENST00000593425 EHBP1Q8NDI1 1231 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 SAP25Q8TEE9 199 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 CRELD1Q96HD1 420 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 LRIG1Q96JA1 1093 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 TIGD1Q96MW7 591 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 SLC4A5Q9BY07 1137 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 GTPBP4Q9BZE4 634 aaKnown RBP16.9■□□□□ 0.3
LIG1-205ENST00000593425 CNTN6Q9UQ52 1028 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 NBEAQ8NFP9 2946 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 ATRXP46100 2492 aa16.9■□□□□ 0.3
LIG1-205ENST00000593425 ITPR1Q14643 2758 aa16.89■□□□□ 0.3
LIG1-205ENST00000593425 ANKRD11Q6UB99 2663 aaPredicted RBP16.89■□□□□ 0.29
LIG1-205ENST00000593425 GOLGA6L4A6NEF3 574 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 PPP1R3GB7ZBB8 358 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 ENC1O14682 589 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 CAPN9O14815 690 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 TRUB2O95900 331 aaKnown RBP16.89■□□□□ 0.29
LIG1-205ENST00000593425 KRT5P13647 590 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 C5AR1P21730 350 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 MZF1P28698 734 aaPredicted RBP16.89■□□□□ 0.29
LIG1-205ENST00000593425 DRD3P35462 400 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 ACADSBP45954 432 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 CCR5P51681 352 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 METAP1P53582 386 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 CETN1Q12798 172 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 KCNH2Q12809 1159 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 DNAJC3Q13217 504 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 RNF219Q5W0B1 726 aaPredicted RBP16.89■□□□□ 0.29
LIG1-205ENST00000593425 BEND5Q7L4P6 421 aa16.89■□□□□ 0.29
LIG1-205ENST00000593425 CIR1Q86X95 450 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms