RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 PITX1P78337 314 aaPredicted RBP13.67□□□□□ -0.22
H3F3B-213ENST00000593254 CAMK2GQ13555 558 aaPredicted RBP13.67□□□□□ -0.22
H3F3B-213ENST00000593254 TAF5Q15542 800 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 PTPRNQ16849 979 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 FNDC3BQ53EP0 1204 aaKnown RBP13.67□□□□□ -0.22
H3F3B-213ENST00000593254 ZC3H12AQ5D1E8 599 aaKnown RBP13.67□□□□□ -0.22
H3F3B-213ENST00000593254 MS4A13Q5J8X5 152 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 MBLAC2Q68D91 279 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 SLC47A2Q86VL8 602 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 PASD1Q8IV76 773 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 MFN1Q8IWA4 741 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 FAM71AQ8IYT1 594 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 FIBINQ8TAL6 211 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 CYB5D2Q8WUJ1 264 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 SIPA1Q96FS4 1042 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 PPP1R13BQ96KQ4 1090 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 LMLNQ96KR4 655 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 SLC2A13Q96QE2 648 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 ITM2CQ9NQX7 267 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 SAMSN1Q9NSI8 373 aaKnown RBP13.67□□□□□ -0.22
H3F3B-213ENST00000593254 ASNSD1Q9NWL6 643 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 WSB2Q9NYS7 404 aaPredicted RBP13.67□□□□□ -0.22
H3F3B-213ENST00000593254 XPO7Q9UIA9 1087 aaKnown RBP13.67□□□□□ -0.22
H3F3B-213ENST00000593254 PLA2G4CQ9UP65 541 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 NFE2L3Q9Y4A8 694 aa13.67□□□□□ -0.22
H3F3B-213ENST00000593254 TYW5A2RUC4 315 aaKnown RBP13.66□□□□□ -0.22
H3F3B-213ENST00000593254 KCNJ18B7U540 433 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 HSF2BPO75031 334 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 NDUFS2O75306 463 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 APOEP02649 317 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 ATP5BP06576 529 aaKnown RBP13.66□□□□□ -0.22
H3F3B-213ENST00000593254 ZNF883P0CG24 379 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 GNSP15586 552 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 EEF1GP26641 437 aaKnown RBP13.66□□□□□ -0.22
H3F3B-213ENST00000593254 KRT9P35527 623 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 TPMTP51580 245 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 KCNMA1Q12791 1236 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 CAMK2BQ13554 666 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 KCNJ12Q14500 433 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 DCAF6Q58WW2 860 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 TCP11X2Q5H9J9 407 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 SYCP2LQ5T4T6 812 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 OLFML1Q6UWY5 402 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 DBX2Q6ZNG2 339 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 RBM43Q6ZSC3 357 aaKnown RBP13.66□□□□□ -0.22
H3F3B-213ENST00000593254 RGL4Q8IZJ4 473 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 C1orf131Q8NDD1 294 aaKnown RBP13.66□□□□□ -0.22
H3F3B-213ENST00000593254 OR2T3Q8NH03 318 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 DNASE2BQ8WZ79 361 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 PRCCQ92733 491 aaPredicted RBP13.66□□□□□ -0.22
H3F3B-213ENST00000593254 FOXJ1Q92949 421 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 TOE1Q96GM8 510 aaKnown RBP13.66□□□□□ -0.22
H3F3B-213ENST00000593254 CRELD1Q96HD1 420 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 BTN2A3PQ96KV6 586 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 NOX5Q96PH1 765 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 STIM2Q9P246 746 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 FHOD1Q9Y613 1164 aa13.66□□□□□ -0.22
H3F3B-213ENST00000593254 ATMINO43313 823 aaPredicted RBP13.65□□□□□ -0.22
H3F3B-213ENST00000593254 C1QL1O75973 258 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 POLR2EP19388 210 aaKnown RBP13.65□□□□□ -0.22
H3F3B-213ENST00000593254 MAOBP27338 520 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 BPIFB4P59827 614 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 CDK17Q00537 523 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 CDH18Q13634 790 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 RAPGEF1Q13905 1077 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 DRAP1Q14919 205 aaPredicted RBP13.65□□□□□ -0.22
H3F3B-213ENST00000593254 PTPN20Q4JDL3 420 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 EFHC1Q5JVL4 640 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 WDR45BQ5MNZ6 344 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 KLHDC7AQ5VTJ3 777 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 RAP1GAP2Q684P5 730 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 C11orf57Q6ZUT1 292 aaPredicted RBP13.65□□□□□ -0.22
H3F3B-213ENST00000593254 FAM183BPQ6ZVS7 135 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 DEFB106AQ8N104 65 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 ZNF366Q8N895 744 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 ENOX1Q8TC92 643 aaKnown RBP13.65□□□□□ -0.22
H3F3B-213ENST00000593254 TTC17Q96AE7 1141 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 MYO19Q96H55 970 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 UBL7Q96S82 380 aaPredicted RBP13.65□□□□□ -0.22
H3F3B-213ENST00000593254 NAA15Q9BXJ9 866 aaKnown RBP13.65□□□□□ -0.22
H3F3B-213ENST00000593254 FBRSQ9HAH7 460 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.65□□□□□ -0.22
H3F3B-213ENST00000593254 INTS6Q9UL03 887 aaKnown RBP13.65□□□□□ -0.22
H3F3B-213ENST00000593254 MYO18BQ8IUG5 2567 aa13.65□□□□□ -0.22
H3F3B-213ENST00000593254 A0A1B0GTW7 788 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 KCNU1A8MYU2 1149 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 LUC7L3O95232 432 aaKnown RBP13.64□□□□□ -0.23
H3F3B-213ENST00000593254 PRB1P04280 392 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 ERBB2P04626 1255 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 SLC2A3P11169 496 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 ACADMP11310 421 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 UCHL3P15374 230 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 TACR2P21452 398 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 OXTRP30559 389 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 CDH5P33151 784 aaPredicted RBP13.64□□□□□ -0.23
H3F3B-213ENST00000593254 CSKP41240 450 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 SNX16P57768 344 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 CYP4F3Q08477 520 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 C19orf57Q0VDD7 668 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 FSCBQ5H9T9 825 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms