RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 GAREM2Q75VX8 874 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 HS6ST3Q8IZP7 471 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 ALLCQ8N6M5 410 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 TDRD5Q8NAT2 981 aaKnown RBP13.87□□□□□ -0.19
VMP1-217ENST00000593168 CCHCR1Q8TD31 782 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.87□□□□□ -0.19
VMP1-217ENST00000593168 CCDC114Q96M63 670 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 GCNAQ96QF7 691 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 KLF16Q9BXK1 252 aaPredicted RBP13.87□□□□□ -0.19
VMP1-217ENST00000593168 RNF38Q9H0F5 515 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 SIK2Q9H0K1 926 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 MFSD1Q9H3U5 465 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 ASAH2Q9NR71 780 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 FAM114A2Q9NRY5 505 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 ETNK2Q9NVF9 386 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 ZDHHC7Q9NXF8 308 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 PPARGC1AQ9UBK2 798 aaKnown RBP13.87□□□□□ -0.19
VMP1-217ENST00000593168 NEU2Q9Y3R4 380 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 SNX10Q9Y5X0 201 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 ANAPC1Q9H1A4 1944 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 PTPRZ1P23471 2315 aaPredicted RBP13.87□□□□□ -0.19
VMP1-217ENST00000593168 FAM186AA6NE01 2351 aa13.87□□□□□ -0.19
VMP1-217ENST00000593168 CFAP69A5D8W1 941 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 C2orf78A6NCI8 922 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 SOBPA7XYQ1 873 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 CCL16O15467 120 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 FGF10O15520 208 aaPredicted RBP13.86□□□□□ -0.19
VMP1-217ENST00000593168 ERLIN1O75477 346 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 MOCS2O96007 188 aaPredicted RBP13.86□□□□□ -0.19
VMP1-217ENST00000593168 EPHB2P29323 1055 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 CLCN5P51795 746 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 GBE1Q04446 702 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 CUL1Q13616 776 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 AUHQ13825 339 aaKnown RBP13.86□□□□□ -0.19
VMP1-217ENST00000593168 PPP1R7Q15435 360 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 MS4A13Q5J8X5 152 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 ARTNQ5T4W7 220 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 PIK3R6Q5UE93 754 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 TMCO3Q6UWJ1 677 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 NPNTQ6UXI9 565 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 ZNF683Q8IZ20 524 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 CCDC89Q8N998 374 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 HNRNPLLQ8WVV9 542 aaKnown RBP13.86□□□□□ -0.19
VMP1-217ENST00000593168 CASKIN2Q8WXE0 1202 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 TBC1D31Q96DN5 1066 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 OLFM3Q96PB7 478 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 CORO1BQ9BR76 489 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 TRIM51Q9BSJ1 452 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 CATSPERBQ9H7T0 1116 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 DTLQ9NZJ0 730 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 XPO7Q9UIA9 1087 aaKnown RBP13.86□□□□□ -0.19
VMP1-217ENST00000593168 HEY1Q9Y5J3 304 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 RIF1Q5UIP0 2472 aaKnown RBP13.86□□□□□ -0.19
VMP1-217ENST00000593168 CLUHO75153 1309 aa13.86□□□□□ -0.19
VMP1-217ENST00000593168 IGLV3-10A0A075B6K4 115 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 BCLAF3A2AJT9 711 aaKnown RBP13.85□□□□□ -0.19
VMP1-217ENST00000593168 ZSCAN5CA6NGD5 496 aaPredicted RBP13.85□□□□□ -0.19
VMP1-217ENST00000593168 DRGXA6NNA5 263 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 WASH4PA8MWX3 477 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 HACD1B0YJ81 288 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 E9PAM4 449 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 H7C0C1 242 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 NCAM2O15394 837 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 PI15O43692 258 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 ACSL4O60488 711 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 XYLBO75191 536 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 RFPL2O75678 378 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 ZNF189O75820 626 aaPredicted RBP13.85□□□□□ -0.19
VMP1-217ENST00000593168 PAPLNO95428 1278 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 KRT14P02533 472 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 HMBSP08397 361 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 MBL2P11226 248 aaPredicted RBP13.85□□□□□ -0.19
VMP1-217ENST00000593168 MYL4P12829 197 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 HDCP19113 662 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 DDX6P26196 483 aaKnown RBP eCLIP13.85□□□□□ -0.19
VMP1-217ENST00000593168 SERPINB6P35237 376 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 ATP5OP48047 213 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 SLC11A2P49281 568 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 HARS2P49590 506 aaKnown RBP13.85□□□□□ -0.19
VMP1-217ENST00000593168 SLC7A9P82251 487 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 SLC10A2Q12908 348 aaPredicted RBP13.85□□□□□ -0.19
VMP1-217ENST00000593168 PDK1Q15118 436 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 LRRC31Q6UY01 552 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 GSTA5Q7RTV2 222 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 C14orf80Q86SX3 495 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 LZTR1Q8N653 840 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 FLCNQ8NFG4 579 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 PRMT1Q99873 361 aaKnown RBP13.85□□□□□ -0.19
VMP1-217ENST00000593168 HINFPQ9BQA5 517 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 TMEM121Q9BTD3 319 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 PRKD2Q9BZL6 878 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 FAM129AQ9BZQ8 928 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 ATXN3LQ9H3M9 355 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 RETREG1Q9H6L5 497 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 DZANK1Q9NVP4 752 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 DONSONQ9NYP3 566 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 NEU3Q9UQ49 428 aa13.85□□□□□ -0.19
VMP1-217ENST00000593168 DENND4CQ5VZ89 1909 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 ESYT3A0FGR9 886 aa13.84□□□□□ -0.19
VMP1-217ENST00000593168 SGK1O00141 431 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms