RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 ARHGEF19Q8IW93 802 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 SCUBE3Q8IX30 993 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 LGI2Q8N0V4 545 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 HJURPQ8NCD3 748 aaPredicted RBP11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 OR14C36Q8NHC7 312 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 FIBINQ8TAL6 211 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 TTC17Q96AE7 1141 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 SERAC1Q96JX3 654 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 MYOCQ99972 504 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 DNAI2Q9GZS0 605 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 TJP2Q9UDY2 1190 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 COQ4Q9Y3A0 265 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 CEP83Q9Y592 693 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 AK5Q9Y6K8 562 aa11.61□□□□□ -0.55
PRKCSH-220ENST00000593104 RTN2O75298 545 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 LUC7L3O95232 432 aaKnown RBP11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 SETSIPP0DME0 302 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 MYF5P13349 255 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 MZF1P28698 734 aaPredicted RBP11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 CD38P28907 300 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 EPHA8P29322 1005 aaPredicted RBP11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 DRD3P35462 400 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 GGCXP38435 758 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 IRAK1P51617 712 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 ZNF445P59923 1031 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 ST8SIA6P61647 398 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 KRT85P78386 507 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 CDH18Q13634 790 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 MS4A13Q5J8X5 152 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 LCLAT1Q6UWP7 414 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 USP30Q70CQ3 517 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 RRAGAQ7L523 313 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 TMPRSS12Q86WS5 348 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 TTC39CQ8N584 583 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 GOLGA1Q92805 767 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 PTPRN2Q92932 1015 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 SLC35C1Q96A29 364 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 FAM149B1Q96BN6 582 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 FBRSQ9HAH7 460 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 ACP6Q9NPH0 428 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 KNTC1P50748 2209 aa11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 ARID1BQ8NFD5 2236 aaPredicted RBP11.6□□□□□ -0.55
PRKCSH-220ENST00000593104 TDRD6O60522 2096 aaKnown RBP11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 TBC1D3DA0A087WVF3 549 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 TBC1D3IA0A087WXS9 549 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 TBC1D3EA0A087X179 549 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 TBC1D3KA0A087X1G2 549 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 FAM170AA1A519 330 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 TBC1D3FA6NER0 549 aaPredicted RBP11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 C10orf142B7Z368 130 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 TBC1D3LB9A6J9 549 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 RNF103O00237 685 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 PAPSS1O43252 624 aaPredicted RBP11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 STX10O60499 249 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 IL1BP01584 269 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 TBC1D3HP0C7X1 549 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 PDGFRAP16234 1089 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 FMO5P49326 533 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 NXPH1P58417 271 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 E2F5Q15329 346 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 ZC3H12AQ5D1E8 599 aaKnown RBP11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 MPP7Q5T2T1 576 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 NUGGCQ68CJ6 796 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 TBC1D3GQ6DHY5 549 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 TBC1D3CQ6IPX1 549 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 DENND1BQ6P3S1 775 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 FBXL19Q6PCT2 694 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 CHSY1Q86X52 802 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 UNC45BQ8IWX7 931 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 TBC1D3Q8IZP1 549 aaPredicted RBP11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 PPM1KQ8N3J5 372 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 OR52K2Q8NGK3 314 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 OR2T34Q8NGX1 318 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 KLK6Q92876 244 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 NXPE2Q96DL1 559 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 SLC39A13Q96H72 371 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 FAXDC2Q96IV6 333 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 ST7Q9NRC1 585 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 CYTH4Q9UIA0 394 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 SARDHQ9UL12 918 aa11.59□□□□□ -0.55
PRKCSH-220ENST00000593104 SYNJ2BP-COX16A0A087WUM0 186 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 EDDM13A0A1B0GTR0 161 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 LRRC72A6NJI9 287 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 BNIP3LO60238 219 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 RNASEH1O60930 286 aaKnown RBP11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 ASLP04424 464 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 CD44P16070 742 aaKnown RBP11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 TACR2P21452 398 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 ECT2LQ008S8 904 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 CENPCQ03188 943 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 CCDC173Q0VFZ6 552 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 TAF5Q15542 800 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 INAVAQ3KP66 663 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 C6orf118Q5T5N4 469 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 KANSL1Q7Z3B3 1105 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 SCML4Q8N228 414 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 LMO3Q8TAP4 145 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 SLC39A7Q92504 469 aa11.58□□□□□ -0.56
PRKCSH-220ENST00000593104 TSC1Q92574 1164 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms