RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 SRPRAP08240 638 aaKnown RBP16.61■□□□□ 0.25
CIRBP-240ENST00000592815 PNMA6AP0CW24 399 aaPredicted RBP16.61■□□□□ 0.25
CIRBP-240ENST00000592815 CCR1P32246 355 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 CLCN1P35523 988 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 MATKP42679 507 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 NUMBP49757 651 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 AFF3P51826 1226 aaKnown RBP16.61■□□□□ 0.25
CIRBP-240ENST00000592815 ARID5BQ14865 1188 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 VWA3BQ502W6 1294 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 HSP90AA4PQ58FG1 418 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 RNF219Q5W0B1 726 aaPredicted RBP16.61■□□□□ 0.25
CIRBP-240ENST00000592815 IL27RAQ6UWB1 636 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 FAM183BPQ6ZVS7 135 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 SLC47A2Q86VL8 602 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 CIR1Q86X95 450 aaPredicted RBP16.61■□□□□ 0.25
CIRBP-240ENST00000592815 NAXDQ8IW45 347 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 C1orf131Q8NDD1 294 aaKnown RBP16.61■□□□□ 0.25
CIRBP-240ENST00000592815 RPL10LQ96L21 214 aaKnown RBP16.61■□□□□ 0.25
CIRBP-240ENST00000592815 PRMT1Q99873 361 aaKnown RBP16.61■□□□□ 0.25
CIRBP-240ENST00000592815 NDST4Q9H3R1 872 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 SYNCQ9H7C4 482 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 SCML1Q9UN30 329 aa16.61■□□□□ 0.25
CIRBP-240ENST00000592815 NUMA1Q14980 2115 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 TARSL2A2RTX5 802 aaKnown RBP16.6■□□□□ 0.25
CIRBP-240ENST00000592815 FAM47DPA6NHR8 397 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 MID1O15344 667 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 CER1O95813 267 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 PRKCSHP14314 528 aaPredicted RBP16.6■□□□□ 0.25
CIRBP-240ENST00000592815 PDGFRAP16234 1089 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 SNX16P57768 344 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 SFSWAPQ12872 951 aaKnown RBP16.6■□□□□ 0.25
CIRBP-240ENST00000592815 NME3Q13232 169 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 TEAD4Q15561 434 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 KIF19Q2TAC6 998 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 DPCR1Q3MIW9 517 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 RABGAP1LQ5R372 815 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 SMYD5Q6GMV2 418 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 USP30Q70CQ3 517 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 MMAAQ8IVH4 418 aaKnown RBP16.6■□□□□ 0.25
CIRBP-240ENST00000592815 FAM71AQ8IYT1 594 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 CCAR2Q8N163 923 aaKnown RBP16.6■□□□□ 0.25
CIRBP-240ENST00000592815 CHCHD4Q8N4Q1 142 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 SETD7Q8WTS6 366 aaKnown RBP16.6■□□□□ 0.25
CIRBP-240ENST00000592815 FAM129BQ96TA1 746 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 TUBGCP2Q9BSJ2 902 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 TM9SF3Q9HD45 589 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 PLCB1Q9NQ66 1216 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 TM7SF3Q9NS93 570 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 KLK13Q9UKR3 277 aa16.6■□□□□ 0.25
CIRBP-240ENST00000592815 FNDC3AQ9Y2H6 1198 aaKnown RBP16.6■□□□□ 0.25
CIRBP-240ENST00000592815 EDDM13A0A1B0GTR0 161 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 PES1O00541 588 aaKnown RBP16.59■□□□□ 0.25
CIRBP-240ENST00000592815 TRIM16O95361 564 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 CD27P26842 260 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 MZF1P28698 734 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-240ENST00000592815 ERCC5P28715 1186 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-240ENST00000592815 SLC8A1P32418 973 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 STK19P49842 368 aaPredicted RBP16.59■□□□□ 0.25
CIRBP-240ENST00000592815 GALCP54803 685 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 BPIFB4P59827 614 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 SLC6A3Q01959 620 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 SLC12A1Q13621 1099 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 CST6Q15828 149 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 MIIPQ5JXC2 388 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 KIAA0895LQ68EN5 471 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 FBXL22Q6P050 247 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 OLFML1Q6UWY5 402 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 STK40Q8N2I9 435 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 IGSF8Q969P0 613 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 OMDQ99983 421 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 NEUROG2Q9H2A3 272 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 PDCL3Q9H2J4 239 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 SERGEFQ9UGK8 458 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 ANKRD6Q9Y2G4 727 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 NEUROG3Q9Y4Z2 214 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 SNX11Q9Y5W9 270 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 KNL1Q8NG31 2342 aa16.59■□□□□ 0.25
CIRBP-240ENST00000592815 A0A1W2PP55 124 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 M0QYT0 321 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 KCNK3O14649 394 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 RNASEH2AO75792 299 aaKnown RBP16.58■□□□□ 0.24
CIRBP-240ENST00000592815 ZNF883P0CG24 379 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 NOS2P35228 1153 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 NNMTP40261 264 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 RNASE9P60153 205 aaKnown RBP16.58■□□□□ 0.24
CIRBP-240ENST00000592815 KCNMA1Q12791 1236 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 AUHQ13825 339 aaKnown RBP16.58■□□□□ 0.24
CIRBP-240ENST00000592815 RAPGEF1Q13905 1077 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 DRAP1Q14919 205 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-240ENST00000592815 ZNF423Q2M1K9 1284 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 PTPN20Q4JDL3 420 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 TTC39BQ5VTQ0 682 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-240ENST00000592815 DPY19L2P1Q6NXN4 242 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 PNPLA1Q8N8W4 532 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 GATA6Q92908 595 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 PTPRN2Q92932 1015 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 RPRD1AQ96P16 312 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-240ENST00000592815 TMEM121BQ9BXQ6 578 aaPredicted RBP16.58■□□□□ 0.24
CIRBP-240ENST00000592815 OSGEPQ9NPF4 335 aa16.58■□□□□ 0.24
CIRBP-240ENST00000592815 DACH1Q9UI36 760 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms