RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 CWC25Q9NXE8 425 aaPredicted RBP6.96□□□□□ -1.3
VMP1-215ENST00000592619 AASSQ9UDR5 926 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 HSF4Q9ULV5 492 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 PCDHB2Q9Y5E7 798 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 ADAMTSL3P82987 1691 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 MAST3O60307 1309 aa6.96□□□□□ -1.3
VMP1-215ENST00000592619 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.95□□□□□ -1.33e-14■■□□□ 14.3
VMP1-215ENST00000592619 PRSS47A8MTI9 375 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 GUCY1B2O75343 617 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 ACP5P13686 325 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 CYP2C18P33260 490 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 CCT4P50991 539 aaKnown RBP6.95□□□□□ -1.3
VMP1-215ENST00000592619 JAK3P52333 1124 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 DCAF7P61962 342 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 GPC5P78333 572 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 PSG6Q00889 435 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 GPR68Q15743 365 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 CDC37Q16543 378 aaPredicted RBP6.95□□□□□ -1.3
VMP1-215ENST00000592619 LY6G5CQ5SRR4 150 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 TMEM63BQ5T3F8 832 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 GPATCH4Q5T3I0 446 aaKnown RBP6.95□□□□□ -1.3
VMP1-215ENST00000592619 KAZNQ674X7 775 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 KCNV1Q6PIU1 500 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 SYNE3Q6ZMZ3 975 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 Q6ZNX1 250 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 NEK10Q6ZWH5 1172 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 KRT77Q7Z794 578 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 ARMC8Q8IUR7 673 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 ADAMTS15Q8TE58 950 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 ADAMTS18Q8TE60 1221 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 TBC1D22AQ8WUA7 517 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 TFAP2BQ92481 460 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 EDC3Q96F86 508 aaKnown RBP6.95□□□□□ -1.3
VMP1-215ENST00000592619 TTC14Q96N46 770 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 LENG8Q96PV6 779 aaPredicted RBP6.95□□□□□ -1.3
VMP1-215ENST00000592619 PHF7Q9BWX1 381 aaPredicted RBP6.95□□□□□ -1.3
VMP1-215ENST00000592619 FSD1LQ9BXM9 530 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 RETREG1Q9H6L5 497 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 SYNPO2LQ9H987 977 aa6.95□□□□□ -1.3
VMP1-215ENST00000592619 GAR1Q9NY12 217 aaKnown RBP6.95□□□□□ -1.3
VMP1-215ENST00000592619 COPG1Q9Y678 874 aaKnown RBP6.95□□□□□ -1.3
VMP1-215ENST00000592619 EIF2AK4Q9P2K8 1649 aaKnown RBP6.94□□□□□ -1.3
VMP1-215ENST00000592619 DAPK1P53355 1430 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 A2MP01023 1474 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 SUV39H1O43463 412 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 TULP3O75386 442 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 URI1O94763 535 aaPredicted RBP6.94□□□□□ -1.3
VMP1-215ENST00000592619 RTN3O95197 1032 aaPredicted RBP6.94□□□□□ -1.3
VMP1-215ENST00000592619 ALDOAP04075 364 aaKnown RBP6.94□□□□□ -1.3
VMP1-215ENST00000592619 TGM1P22735 817 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 ABCD3P28288 659 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 GALNT2Q10471 571 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 LMAN2Q12907 356 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 PDE1CQ14123 709 aaPredicted RBP6.94□□□□□ -1.3
VMP1-215ENST00000592619 CCDC30Q5VVM6 783 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 TMEM88Q6PEY1 159 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 GALNT4Q8N4A0 578 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 LSM14AQ8ND56 463 aaKnown RBP6.94□□□□□ -1.3
VMP1-215ENST00000592619 TDRD7Q8NHU6 1098 aaKnown RBP6.94□□□□□ -1.3
VMP1-215ENST00000592619 PROKR1Q8TCW9 393 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 CLEC4CQ8WTT0 213 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 UCMAQ8WVF2 138 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 MASTLQ96GX5 879 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 APOPT1Q96IL0 206 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 TREX2Q9BQ50 279 aaPredicted RBP6.94□□□□□ -1.3
VMP1-215ENST00000592619 ELOVL1Q9BW60 279 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 RNF26Q9BY78 433 aaPredicted RBP6.94□□□□□ -1.3
VMP1-215ENST00000592619 STN1Q9H668 368 aaKnown RBP6.94□□□□□ -1.3
VMP1-215ENST00000592619 ABHD10Q9NUJ1 306 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 SEMA5BQ9P283 1151 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 CNOT7Q9UIV1 285 aaKnown RBP6.94□□□□□ -1.3
VMP1-215ENST00000592619 CD207Q9UJ71 328 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 FZD4Q9ULV1 537 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 ENTPD2Q9Y5L3 495 aa6.94□□□□□ -1.3
VMP1-215ENST00000592619 ABCC5O15440 1437 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 RRBP1Q9P2E9 1410 aaKnown RBP6.93□□□□□ -1.3
VMP1-215ENST00000592619 FAM135AQ9P2D6 1515 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 A0A1W2PPH5 198 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 CCDC151A5D8V7 595 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 PEX12O00623 359 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 PRAMEF2O60811 474 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 C1RP00736 705 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 HSP90AB1P08238 724 aaKnown RBP6.93□□□□□ -1.3
VMP1-215ENST00000592619 NPSP0C0P6 89 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 TSPY4P0CV99 314 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 TSPY10P0CW01 314 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 ZNF20P17024 532 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 GALNSP34059 522 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 RAE1P78406 368 aaKnown RBP6.93□□□□□ -1.3
VMP1-215ENST00000592619 CFHR3Q02985 330 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 CAMK1Q14012 370 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 PRICKLE4Q2TBC4 344 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 SPATA1Q5VX52 437 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 ZSCAN30Q86W11 494 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 LAS2Q8IYD9 372 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 TTC30BQ8N4P2 665 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 LINC01465Q8N7H1 131 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 ZCCHC10Q8TBK6 192 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 KAZALD1Q96I82 304 aa6.93□□□□□ -1.3
VMP1-215ENST00000592619 COQ10AQ96MF6 247 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms