RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 LRRC71Q8N4P6 559 aa18.4■□□□□ 0.54
SPC24-206ENST00000592540 DCLK2Q8N568 766 aa18.4■□□□□ 0.54
SPC24-206ENST00000592540 BHLHE22Q8NFJ8 381 aaPredicted RBP18.4■□□□□ 0.54
SPC24-206ENST00000592540 CXorf38Q8TB03 319 aa18.4■□□□□ 0.54
SPC24-206ENST00000592540 HTR3CQ8WXA8 447 aa18.4■□□□□ 0.54
SPC24-206ENST00000592540 AKT1S1Q96B36 256 aa18.4■□□□□ 0.54
SPC24-206ENST00000592540 PADI4Q9UM07 663 aa18.4■□□□□ 0.54
SPC24-206ENST00000592540 A0A0A0MRY4 1105 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 H3BSA7 217 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 CAPNS1P04632 268 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 P4HA1P13674 534 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 MAGEA12P43365 314 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 NDST1P52848 882 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 PKNOX1P55347 436 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 CEACAM7Q14002 265 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 DPYSL2Q16555 572 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 TMEM132AQ24JP5 1023 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 COLGALT1Q8NBJ5 622 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 RP9Q8TA86 221 aaKnown RBP18.39■□□□□ 0.53
SPC24-206ENST00000592540 ZBED3Q96IU2 234 aaPredicted RBP18.39■□□□□ 0.53
SPC24-206ENST00000592540 ZNF668Q96K58 619 aaPredicted RBP18.39■□□□□ 0.53
SPC24-206ENST00000592540 SPATA13Q96N96 652 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 CPNE1Q99829 537 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 WDR55Q9H6Y2 383 aaPredicted RBP18.39■□□□□ 0.53
SPC24-206ENST00000592540 SYBUQ9NX95 663 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 DTLQ9NZJ0 730 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 THEGQ9P2T0 379 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 HESX1Q9UBX0 185 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 BARX2Q9UMQ3 279 aaPredicted RBP18.39■□□□□ 0.53
SPC24-206ENST00000592540 CEPT1Q9Y6K0 416 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 PRSS51A0A1B0GVH4 220 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 LACTBL1A8MY62 500 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 ACKR2O00590 384 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 TRMUO75648 421 aaKnown RBP18.39■□□□□ 0.53
SPC24-206ENST00000592540 TFE3P19532 575 aaPredicted RBP18.39■□□□□ 0.53
SPC24-206ENST00000592540 UBA1P22314 1058 aaKnown RBP18.39■□□□□ 0.53
SPC24-206ENST00000592540 MLH1P40692 756 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 EMP3P54852 163 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 ADARP55265 1226 aaKnown RBP18.39■□□□□ 0.53
SPC24-206ENST00000592540 SLC6A3Q01959 620 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 DCTN2Q13561 401 aaKnown RBP18.39■□□□□ 0.53
SPC24-206ENST00000592540 GRTP1Q5TC63 336 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 JADE1Q6IE81 842 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 PMF1Q6P1K2 205 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 CES3Q6UWW8 571 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 AMIGO2Q86SJ2 522 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 MIPOL1Q8TD10 442 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 ISL2Q96A47 359 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 RCN3Q96D15 328 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 TEPSINQ96N21 525 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 NAT9Q9BTE0 207 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 SLC2A11Q9BYW1 496 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 C2orf40Q9H1Z8 148 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 CDT1Q9H211 546 aa18.39■□□□□ 0.53
SPC24-206ENST00000592540 SUDS3Q9H7L9 328 aaPredicted RBP18.39■□□□□ 0.53
SPC24-206ENST00000592540 NEMP1O14524 444 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 CFLARO15519 480 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 ZSCAN9O15535 394 aaPredicted RBP18.38■□□□□ 0.53
SPC24-206ENST00000592540 FARP2O94887 1054 aaPredicted RBP18.38■□□□□ 0.53
SPC24-206ENST00000592540 ADRM1Q16186 407 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 FAM160B1Q5W0V3 765 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 SCUBE3Q8IX30 993 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 C12orf29Q8N999 325 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 ADAMTS5Q9UNA0 930 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 MFHAS1Q9Y4C4 1052 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 COL4A5P29400 1685 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 KPNA7A9QM74 516 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.38■□□□□ 0.53
SPC24-206ENST00000592540 TRIM13O60858 407 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 TRPA1O75762 1119 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 DGKIO75912 1065 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 CDH2P19022 906 aaPredicted RBP18.38■□□□□ 0.53
SPC24-206ENST00000592540 ATICP31939 592 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 SERPINB8P50452 374 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 BACE1P56817 501 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 GOLGA7BQ2TAP0 167 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 LSM12Q3MHD2 195 aaKnown RBP18.38■□□□□ 0.53
SPC24-206ENST00000592540 PGAM4Q8N0Y7 254 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 RNF148Q8N7C7 305 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 DLG3Q92796 817 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 USP13Q92995 863 aaPredicted RBP18.38■□□□□ 0.53
SPC24-206ENST00000592540 CERS2Q96G23 380 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 ATXN7L3BQ96GX2 97 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 INO80BQ9C086 356 aaPredicted RBP18.38■□□□□ 0.53
SPC24-206ENST00000592540 ILKAPQ9H0C8 392 aaPredicted RBP18.38■□□□□ 0.53
SPC24-206ENST00000592540 VRTNQ9H8Y1 702 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 EIF2B3Q9NR50 452 aaKnown RBP18.38■□□□□ 0.53
SPC24-206ENST00000592540 ADAM28Q9UKQ2 775 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 AFG3L2Q9Y4W6 797 aa18.38■□□□□ 0.53
SPC24-206ENST00000592540 INO80B-WBP1J3KQ70 363 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 MATN2O00339 956 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 BCAS2O75934 225 aaPredicted RBP18.37■□□□□ 0.53
SPC24-206ENST00000592540 AMHP03971 560 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 POLBP06746 335 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 DESP17661 470 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 ME2P23368 584 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 ATXN1P54253 815 aaKnown RBP18.37■□□□□ 0.53
SPC24-206ENST00000592540 NCBP2-AS2Q69YL0 99 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 HACE1Q8IYU2 909 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 TMEM102Q8N9M5 508 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms