RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 RRN3Q9NYV6 651 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 SUN2Q9UH99 717 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 VANGL2Q9ULK5 521 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 STAP1Q9ULZ2 295 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 SLC6A14Q9UN76 642 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 ERVW-1Q9UQF0 538 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 HS3ST4Q9Y661 456 aa14.33□□□□□ -0.12
APOC1-208ENST00000592535 CNOT1A5YKK6 2376 aaKnown RBP14.33□□□□□ -0.12
APOC1-208ENST00000592535 A0A1B0GVM2 712 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 TCAF2A6NFQ2 919 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 MEI4A8MW99 385 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 PAGE1O75459 146 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 MOCS3O95396 460 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 CYP1A1P04798 512 aaPredicted RBP14.32□□□□□ -0.12
APOC1-208ENST00000592535 C7P10643 843 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 PDGFRAP16234 1089 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 CHRNB2P17787 502 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 CDK11BP21127 795 aaKnown RBP14.32□□□□□ -0.12
APOC1-208ENST00000592535 MZF1P28698 734 aaPredicted RBP14.32□□□□□ -0.12
APOC1-208ENST00000592535 FLT3P36888 993 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 MAPK8P45983 427 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 FMO1Q01740 532 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 CDR2Q01850 454 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 RABGAP1LQ5R372 815 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 TTC39BQ5VTQ0 682 aaPredicted RBP14.32□□□□□ -0.12
APOC1-208ENST00000592535 DAB2IPQ5VWQ8 1189 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 CXorf57Q6NSI4 855 aaKnown RBP14.32□□□□□ -0.12
APOC1-208ENST00000592535 TRNP1Q6NT89 227 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 APTXQ7Z2E3 356 aaKnown RBP14.32□□□□□ -0.12
APOC1-208ENST00000592535 C14orf80Q86SX3 495 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 ZNF677Q86XU0 584 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 DHX40Q8IX18 779 aaKnown RBP14.32□□□□□ -0.12
APOC1-208ENST00000592535 AOPEPQ8N6M6 819 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 CEP76Q8TAP6 659 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 NT5C3BQ969T7 300 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 RPRD1AQ96P16 312 aaPredicted RBP14.32□□□□□ -0.12
APOC1-208ENST00000592535 SPAG5Q96R06 1193 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 NUP58Q9BVL2 599 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 FBRSQ9HAH7 460 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 CAPN10Q9HC96 672 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 DAAM1Q9Y4D1 1078 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 DOCK4Q8N1I0 1966 aa14.32□□□□□ -0.12
APOC1-208ENST00000592535 NCOR2Q9Y618 2525 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 TTC34A8MYJ7 566 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 I6L893 689 aaPredicted RBP14.31□□□□□ -0.12
APOC1-208ENST00000592535 SIN3BO75182 1162 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 ADCY5O95622 1261 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 SRPRAP08240 638 aaKnown RBP14.31□□□□□ -0.12
APOC1-208ENST00000592535 ADRB1P08588 477 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 SERPINF2P08697 491 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 ATP1A3P13637 1013 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 STAT1P42224 750 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 CXCR3P49682 368 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 ECT2LQ008S8 904 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 UBXN1Q04323 297 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 DEUP1Q05D60 604 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 MTA1Q13330 715 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 HNRNPA1L2Q32P51 320 aaKnown RBP14.31□□□□□ -0.12
APOC1-208ENST00000592535 UAP1L1Q3KQV9 507 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 SLC25A52Q3SY17 297 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 WDR45BQ5MNZ6 344 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 BRMS1LQ5PSV4 323 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 SYCP2LQ5T4T6 812 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 DCAF12L1Q5VU92 463 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 ZNF776Q68DI1 518 aaPredicted RBP14.31□□□□□ -0.12
APOC1-208ENST00000592535 RABEPKQ7Z6M1 372 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 KDM1BQ8NB78 822 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 MSANTD4Q8NCY6 345 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 CADM4Q8NFZ8 388 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 NEK11Q8NG66 645 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 OR52K2Q8NGK3 314 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 PGAP3Q96FM1 320 aaPredicted RBP14.31□□□□□ -0.12
APOC1-208ENST00000592535 RPL10LQ96L21 214 aaKnown RBP14.31□□□□□ -0.12
APOC1-208ENST00000592535 TKTL2Q9H0I9 626 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 SIK2Q9H0K1 926 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 RSPH9Q9H1X1 276 aaPredicted RBP14.31□□□□□ -0.12
APOC1-208ENST00000592535 WDCPQ9H6R7 721 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 TMPRSS4Q9NRS4 437 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 ARHGEF38Q9NXL2 777 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 SLCO3A1Q9UIG8 710 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 TMEM59LQ9UK28 342 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 SNX10Q9Y5X0 201 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 ITIH6Q6UXX5 1313 aa14.31□□□□□ -0.12
APOC1-208ENST00000592535 CACNA1EQ15878 2313 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 LRRC10BA6NIK2 292 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 METTL12A8MUP2 240 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 KCNK5O95279 499 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 DNTTP04053 509 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 ACSL1P33121 698 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 STK19P49842 368 aaPredicted RBP14.3□□□□□ -0.12
APOC1-208ENST00000592535 PLK1P53350 603 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 ZBTB16Q05516 673 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 GFPT1Q06210 699 aaPredicted RBP14.3□□□□□ -0.12
APOC1-208ENST00000592535 SLC12A1Q13621 1099 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 C5orf22Q49AR2 442 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 ANO6Q4KMQ2 910 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 C9orf64Q5T6V5 341 aa14.3□□□□□ -0.12
APOC1-208ENST00000592535 RNF219Q5W0B1 726 aaPredicted RBP14.3□□□□□ -0.12
APOC1-208ENST00000592535 SND1Q7KZF4 910 aaKnown RBP eCLIP14.3□□□□□ -0.125e-25■■■■□ 21
APOC1-208ENST00000592535 PHLDB2Q86SQ0 1253 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms