RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 FNDC3BQ53EP0 1204 aaKnown RBP14.38□□□□□ -0.11
CLIP3-205ENST00000592017 SPDYCQ5MJ68 293 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 BRMS1LQ5PSV4 323 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 RABGAP1LQ5R372 815 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 ACAD10Q6JQN1 1059 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 KIAA0907Q7Z7F0 614 aaPredicted RBP14.38□□□□□ -0.11
CLIP3-205ENST00000592017 ADIPOR2Q86V24 386 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 FAM131BQ86XD5 332 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 ZNF557Q8N988 423 aaPredicted RBP14.38□□□□□ -0.11
CLIP3-205ENST00000592017 CYB5D2Q8WUJ1 264 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 RXFP2Q8WXD0 754 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 EDEM3Q9BZQ6 932 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 MKRN2Q9H000 416 aaKnown RBP14.38□□□□□ -0.11
CLIP3-205ENST00000592017 TAS2R14Q9NYV8 317 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 AIPL1Q9NZN9 384 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 VANGL2Q9ULK5 521 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 CYP8B1Q9UNU6 501 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 PAXBP1Q9Y5B6 917 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 SNX10Q9Y5X0 201 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 HS3ST4Q9Y661 456 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 SPAG17Q6Q759 2223 aa14.38□□□□□ -0.11
CLIP3-205ENST00000592017 GON4LQ3T8J9 2241 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 A0A1W2PQJ5 194 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 NPC1O15118 1278 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 CBFA2T2O43439 604 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 ITPKAP23677 461 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 CXCR3P49682 368 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 GSCP56915 257 aaPredicted RBP14.37□□□□□ -0.11
CLIP3-205ENST00000592017 RPL6Q02878 288 aaKnown RBP14.37□□□□□ -0.11
CLIP3-205ENST00000592017 MTA1Q13330 715 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 AUHQ13825 339 aaKnown RBP14.37□□□□□ -0.11
CLIP3-205ENST00000592017 STARD3Q14849 445 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 FSCBQ5H9T9 825 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 PPM1JQ5JR12 505 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 LYSMD4Q5XG99 296 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 MBLAC2Q68D91 279 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 IL31Q6EBC2 164 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 FBXL22Q6P050 247 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 KIAA1324Q6UXG2 1013 aaKnown RBP14.37□□□□□ -0.11
CLIP3-205ENST00000592017 SERPINA13PQ6UXR4 307 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 SLC36A4Q6YBV0 504 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 ZNF571Q7Z3V5 609 aaPredicted RBP14.37□□□□□ -0.11
CLIP3-205ENST00000592017 DNAAF5Q86Y56 855 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.37□□□□□ -0.11
CLIP3-205ENST00000592017 C3orf20Q8ND61 904 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 FIBINQ8TAL6 211 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 NT5C3BQ969T7 300 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 PGAP3Q96FM1 320 aaPredicted RBP14.37□□□□□ -0.11
CLIP3-205ENST00000592017 LMLNQ96KR4 655 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 MCEEQ96PE7 176 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 PRMT1Q99873 361 aaKnown RBP14.37□□□□□ -0.11
CLIP3-205ENST00000592017 SYT11Q9BT88 431 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 EDEM2Q9BV94 578 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 ANLNQ9NQW6 1124 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 TMPRSS4Q9NRS4 437 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 ARHGEF38Q9NXL2 777 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 PILRBQ9UKJ0 227 aa14.37□□□□□ -0.11
CLIP3-205ENST00000592017 ANKRD62A6NC57 917 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 C2CD4BA6NLJ0 364 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 C4orf47A7E2U8 309 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 CDX4O14627 284 aaPredicted RBP14.36□□□□□ -0.11
CLIP3-205ENST00000592017 ATMINO43313 823 aaPredicted RBP14.36□□□□□ -0.11
CLIP3-205ENST00000592017 SYNCRIPO60506 623 aaKnown RBP14.36□□□□□ -0.11
CLIP3-205ENST00000592017 ZNF217O75362 1048 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 GYPCP04921 128 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 POLR2EP19388 210 aaKnown RBP14.36□□□□□ -0.11
CLIP3-205ENST00000592017 GPD1P21695 349 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 RRM1P23921 792 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 PRKCIP41743 596 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 IRAK1P51617 712 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 CCDC14Q49A88 953 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 RAB6CQ53S08 254 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 SH3PXD2AQ5TCZ1 1133 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 TTC39BQ5VTQ0 682 aaPredicted RBP14.36□□□□□ -0.11
CLIP3-205ENST00000592017 ARCQ7LC44 396 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 C14orf80Q86SX3 495 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 SYT12Q8IV01 421 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 SLC41A1Q8IVJ1 513 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 MCOLN2Q8IZK6 566 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 CCAR2Q8N163 923 aaKnown RBP14.36□□□□□ -0.11
CLIP3-205ENST00000592017 FAM172AQ8WUF8 416 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 IGSF8Q969P0 613 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 RAB6CQ9H0N0 254 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 LUC7L2Q9Y383 392 aaKnown RBP14.36□□□□□ -0.11
CLIP3-205ENST00000592017 ITIH6Q6UXX5 1313 aa14.36□□□□□ -0.11
CLIP3-205ENST00000592017 A0A1B0GVM2 712 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 TCAF2A6NFQ2 919 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 I6L893 689 aaPredicted RBP14.35□□□□□ -0.11
CLIP3-205ENST00000592017 DDX3XO00571 662 aaKnown RBP eCLIP14.35□□□□□ -0.11
CLIP3-205ENST00000592017 AP5Z1O43299 807 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 MOCS3O95396 460 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 ATP5BP06576 529 aaKnown RBP14.35□□□□□ -0.11
CLIP3-205ENST00000592017 EPHX1P07099 455 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 HLA-EP13747 358 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 RFC1P35251 1148 aaPredicted RBP14.35□□□□□ -0.11
CLIP3-205ENST00000592017 CSKP41240 450 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 PTPN9P43378 593 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 COPAP53621 1224 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 ZBED6P86452 979 aa14.35□□□□□ -0.11
CLIP3-205ENST00000592017 ZNF33AQ06730 810 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms