RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CD70P32970 193 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 MATKP42679 507 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 ACADSBP45954 432 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 AFF3P51826 1226 aaKnown RBP10.79□□□□□ -0.68
VPS4B-207ENST00000591519 EIF4EBP2Q13542 120 aaPredicted RBP10.79□□□□□ -0.68
VPS4B-207ENST00000591519 HLA-BQ31612 363 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 LCE2AQ5TA79 106 aaPredicted RBP10.79□□□□□ -0.68
VPS4B-207ENST00000591519 USP30Q70CQ3 517 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 TMEM110Q86TL2 294 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 ARHGEF19Q8IW93 802 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 ZCCHC9Q8N567 271 aaKnown RBP10.79□□□□□ -0.68
VPS4B-207ENST00000591519 WFDC5Q8TCV5 224 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 CLEC4CQ8WTT0 213 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 KREMEN1Q96MU8 473 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 BTBD1Q9H0C5 482 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 MIR1-1HGQ9H1L0 117 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 RSPH9Q9H1X1 276 aaPredicted RBP10.79□□□□□ -0.68
VPS4B-207ENST00000591519 C6orf106Q9H6K1 298 aaPredicted RBP10.79□□□□□ -0.68
VPS4B-207ENST00000591519 GAREM1Q9H706 876 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 IL21RQ9HBE5 538 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 SGK2Q9HBY8 427 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 INTS6Q9UL03 887 aaKnown RBP10.79□□□□□ -0.68
VPS4B-207ENST00000591519 MUC22E2RYF6 1773 aaPredicted RBP10.79□□□□□ -0.68
VPS4B-207ENST00000591519 IGF2RP11717 2491 aa10.79□□□□□ -0.68
VPS4B-207ENST00000591519 PIK3R2O00459 728 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 DKK1O94907 266 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 SEMA4FO95754 770 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 ASLP04424 464 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 FTH1P19P0C7X4 201 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 CSNK1EP49674 416 aaKnown RBP10.78□□□□□ -0.68
VPS4B-207ENST00000591519 MMP16P51512 607 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 MS4A13Q5J8X5 152 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 FAM124AQ86V42 546 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 CREBRFQ8IUR6 639 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 ZNF366Q8N895 744 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 HJURPQ8NCD3 748 aaPredicted RBP10.78□□□□□ -0.68
VPS4B-207ENST00000591519 BAHD1Q8TBE0 780 aaPredicted RBP10.78□□□□□ -0.68
VPS4B-207ENST00000591519 DQX1Q8TE96 717 aaKnown RBP10.78□□□□□ -0.68
VPS4B-207ENST00000591519 ZNF606Q8WXB4 792 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 BIRC7Q96CA5 298 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 MYEOVQ96EZ4 313 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 MRGPRX3Q96LB0 322 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 PRICKLE1Q96MT3 831 aaPredicted RBP10.78□□□□□ -0.68
VPS4B-207ENST00000591519 SERPINB11Q96P15 392 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 ORAI3Q9BRQ5 295 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 TRIM62Q9BVG3 475 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 MIS12Q9H081 205 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 TM7SF3Q9NS93 570 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 NAALADL1Q9UQQ1 740 aa10.78□□□□□ -0.68
VPS4B-207ENST00000591519 APOBEC2Q9Y235 224 aaKnown RBP10.78□□□□□ -0.68
VPS4B-207ENST00000591519 ZZEF1O43149 2961 aa10.77□□□□□ -0.68
VPS4B-207ENST00000591519 FAM208BQ5VWN6 2430 aa10.77□□□□□ -0.68
VPS4B-207ENST00000591519 A0A1B0GVT2 93 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 TARSL2A2RTX5 802 aaKnown RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 FLRT2O43155 660 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 MED7O43513 233 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 CALCAP01258 141 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 IGLV3-25P01717 112 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 AFPP02771 609 aaKnown RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 DNTTP04053 509 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 SRPRAP08240 638 aaKnown RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 CD27P26842 260 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 GRIA4P48058 902 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 RPS24P62847 133 aaKnown RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 YWHAZP63104 245 aaKnown RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 SFSWAPQ12872 951 aaKnown RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 PAK1Q13153 545 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 SUZ12Q15022 739 aaKnown RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 TEAD4Q15561 434 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 KIF19Q2TAC6 998 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 HNRNPA1L2Q32P51 320 aaKnown RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 TTC31Q49AM3 519 aaPredicted RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 FSCBQ5H9T9 825 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 C9orf64Q5T6V5 341 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 SYPL2Q5VXT5 272 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 ZNF776Q68DI1 518 aaPredicted RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 CCNI2Q6ZMN8 369 aaPredicted RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 ENOSF1Q7L5Y1 443 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 SLCO6A1Q86UG4 719 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 MFN1Q8IWA4 741 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 ZCCHC14Q8WYQ9 949 aaKnown RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 MRGPRX2Q96LB1 330 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 FAM81BQ96LP2 452 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 MED15Q96RN5 788 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 CDC6Q99741 560 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 SRRTQ9BXP5 876 aaKnown RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 THAP9Q9H5L6 903 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 TM9SF3Q9HD45 589 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 STIM2Q9P246 746 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 NCKAP1Q9Y2A7 1128 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 ANKRD6Q9Y2G4 727 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 FNDC3AQ9Y2H6 1198 aaKnown RBP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.77□□□□□ -0.69
VPS4B-207ENST00000591519 SLCO1B1Q9Y6L6 691 aa10.77□□□□□ -0.69
VPS4B-207ENST00000591519 PLXNB3Q9ULL4 1909 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 TYW5A2RUC4 315 aaKnown RBP10.76□□□□□ -0.69
VPS4B-207ENST00000591519 J3QL48 77 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 TAF4O00268 1085 aa10.76□□□□□ -0.69
VPS4B-207ENST00000591519 PAPSS1O43252 624 aaPredicted RBP10.76□□□□□ -0.69
VPS4B-207ENST00000591519 PCDHGA12O60330 932 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms