RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 GABPAQ06546 454 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 PRKG1Q13976 671 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 DPYSL3Q14195 570 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 MYBPC2Q14324 1141 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 USP41Q3LFD5 358 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 KRT39Q6A163 491 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 KYQ8NBH2 561 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 PCYOX1LQ8NBM8 494 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 FBXL13Q8NEE6 735 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 ACDQ96AP0 544 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 PRMT6Q96LA8 375 aaPredicted RBP15.53■□□□□ 0.08
CIRBP-228ENST00000590347 IL12RB2Q99665 862 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 APBA2Q99767 749 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 ACO2Q99798 780 aaKnown RBP15.53■□□□□ 0.08
CIRBP-228ENST00000590347 WDR41Q9HAD4 459 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 PNPLA3Q9NST1 481 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 ZNF831Q5JPB2 1677 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 ZNFX1Q9P2E3 1918 aaKnown RBP15.53■□□□□ 0.08
CIRBP-228ENST00000590347 MICAL3Q7RTP6 2002 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 SOBPA7XYQ1 873 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 ZNF839A8K0R7 811 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 HTRA2O43464 458 aaPredicted RBP15.53■□□□□ 0.08
CIRBP-228ENST00000590347 MATN1P21941 496 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 HSD17B4P51659 736 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 RAD23AP54725 363 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 ART3Q13508 389 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 CASC4Q6P4E1 433 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 POTEAQ6S8J7 498 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 SH3BP5LQ7L8J4 393 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 CARM1Q86X55 608 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 MCF2L2Q86YR7 1114 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 CDAN1Q8IWY9 1227 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 NETO2Q8NC67 525 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 FEZF2Q8TBJ5 459 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 SGCDQ92629 289 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 HTRA1Q92743 480 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 WDR18Q9BV38 432 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 ITGB1BP2Q9UKP3 347 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 EMCNQ9ULC0 261 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 RABL2BQ9UNT1 228 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 PCDHB4Q9Y5E5 795 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 TLL2Q9Y6L7 1015 aa15.53■□□□□ 0.08
CIRBP-228ENST00000590347 KIAA1551Q9HCM1 1747 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 IQCA1LA6NCM1 817 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 GSRP00390 522 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 CFBP00751 764 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 APOEP02649 317 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 MT-ND1P03886 318 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 INHBBP09529 407 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 HSPA8P11142 646 aaKnown RBP15.52■□□□□ 0.08
CIRBP-228ENST00000590347 TFE3P19532 575 aaPredicted RBP15.52■□□□□ 0.08
CIRBP-228ENST00000590347 ALDH4A1P30038 563 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 JAG1P78504 1218 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 SELENBP1Q13228 472 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 DARS2Q6PI48 645 aaKnown RBP15.52■□□□□ 0.08
CIRBP-228ENST00000590347 CES3Q6UWW8 571 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 HSD17B14Q9BPX1 270 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 LXNQ9BS40 222 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 NPLQ9BXD5 320 aaPredicted RBP15.52■□□□□ 0.08
CIRBP-228ENST00000590347 ZNF277Q9NRM2 450 aaPredicted RBP15.52■□□□□ 0.08
CIRBP-228ENST00000590347 HES2Q9Y543 173 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 ANKRD12Q6UB98 2062 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 PRSS51A0A1B0GVH4 220 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 ZBBXA8MT70 800 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 AKAP10O43572 662 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 BAIAP3O94812 1187 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 ENDOUP21128 410 aaKnown RBP15.52■□□□□ 0.08
CIRBP-228ENST00000590347 IL1R2P27930 398 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 RPS3AP61247 264 aaKnown RBP15.52■□□□□ 0.08
CIRBP-228ENST00000590347 KCTD8Q6ZWB6 473 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 STXBP4Q6ZWJ1 553 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 CMC1Q7Z7K0 106 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 SIX6OS1Q8N1H7 587 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 DEPDC1BQ8WUY9 529 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 MXRA8Q9BRK3 442 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 PLAC1Q9HBJ0 212 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 ITM2CQ9NQX7 267 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 FAM198AQ9UFP1 575 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 AP4S1Q9Y587 144 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 TEX264Q9Y6I9 313 aa15.52■□□□□ 0.08
CIRBP-228ENST00000590347 HSPA4LO95757 839 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 ITGAVP06756 1048 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 CHRNGP07510 517 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 TMEM191BP0C7N4 346 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 PTPN9P43378 593 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 GTF2A2P52657 109 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 LSM3P62310 102 aaKnown RBP15.52■□□□□ 0.07
CIRBP-228ENST00000590347 INAVAQ3KP66 663 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 ZNF772Q68DY9 489 aaPredicted RBP15.52■□□□□ 0.07
CIRBP-228ENST00000590347 PADI6Q6TGC4 694 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 RFPL4BQ6ZWI9 263 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 SLC35B2Q8TB61 432 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 SPATA18Q8TC71 538 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 SLC39A3Q9BRY0 314 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 TP63Q9H3D4 680 aaPredicted RBP15.52■□□□□ 0.07
CIRBP-228ENST00000590347 SMOXQ9NWM0 555 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 AURKCQ9UQB9 309 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 CPQQ9Y646 472 aa15.52■□□□□ 0.07
CIRBP-228ENST00000590347 H7C0C1 242 aa15.51■□□□□ 0.07
CIRBP-228ENST00000590347 TPP1O14773 563 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms