RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 AFMP43652 599 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 STK19P49842 368 aaPredicted RBP13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 RAD23BP54727 409 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 RPS24P62847 133 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 DAB2P98082 770 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 NFKB2Q00653 900 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 ADIGQ0VDE8 80 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 BSPRYQ5W0U4 402 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 TBC1D3GQ6DHY5 549 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 TBC1D3CQ6IPX1 549 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 SND1Q7KZF4 910 aaKnown RBP eCLIP13.25□□□□□ -0.296e-16■■■■■ 42.1
PRKCSH-210ENST00000589990 MFN1Q8IWA4 741 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 TBC1D3Q8IZP1 549 aaPredicted RBP13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 MFSD2AQ8NA29 543 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 TMC2Q8TDI7 906 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 SNRNP27Q8WVK2 155 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 SEMA4DQ92854 862 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 RPL10LQ96L21 214 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 MYOCQ99972 504 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 KCTD10Q9H3F6 313 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 ERVW-1Q9UQF0 538 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 SSUH2Q9Y2M2 353 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 MORC2Q9Y6X9 1032 aaPredicted RBP13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 U3KQA8 63 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 KIF26BQ2KJY2 2108 aa13.25□□□□□ -0.29
PRKCSH-210ENST00000589990 KLRC4O43908 158 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 RNASEH1O60930 286 aaKnown RBP13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 GABBR2O75899 941 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 NR3C1P04150 777 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 DGKAP23743 735 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 LSSP48449 732 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 NASPP49321 788 aaPredicted RBP13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 UCNP55089 124 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 ST8SIA6P61647 398 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 E2F1Q01094 437 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 AMPD3Q01432 767 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 ZNF211Q13398 564 aaPredicted RBP13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 PITRM1Q5JRX3 1037 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 SLC9A9Q8IVB4 645 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 CFAP52Q8N1V2 620 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 CARNMT1Q8N4J0 409 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 EXD3Q8N9H8 876 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 LINC00301Q8NCQ3 95 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 FIBINQ8TAL6 211 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 PTPRN2Q92932 1015 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 POLR1BQ9H9Y6 1135 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 CYTH4Q9UIA0 394 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 SARDHQ9UL12 918 aa13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 UTP20O75691 2785 aaKnown RBP13.24□□□□□ -0.29
PRKCSH-210ENST00000589990 BSNQ9UPA5 3926 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 PIK3R2O00459 728 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 IKBKBO14920 756 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 POLR2DO15514 142 aaKnown RBP13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 IL1BP01584 269 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 IGLV3-27P01718 113 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 SLFN14P0C7P3 912 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 MZF1P28698 734 aaPredicted RBP13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 VAMP7P51809 220 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 NFATC3Q12968 1075 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 ARID5BQ14865 1188 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 STK38Q15208 465 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 GOLGA7BQ2TAP0 167 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 SLC45A4Q5BKX6 768 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 C3orf38Q5JPI3 329 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 COLEC12Q5KU26 742 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 ARHGAP17Q68EM7 881 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 APCDD1Q8J025 514 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 OXR1Q8N573 874 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 IQUBQ8NA54 791 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 ANKRD52Q8NB46 1076 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 OR4C6Q8NH72 309 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 RNF139Q8WU17 664 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 UBXN6Q9BZV1 441 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 NUCKS1Q9H1E3 243 aaKnown RBP13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 CISHQ9NSE2 258 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 SATB2Q9UPW6 733 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 MTMR6Q9Y217 621 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 RELNP78509 3460 aa13.23□□□□□ -0.29
PRKCSH-210ENST00000589990 LRRK2Q5S007 2527 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 UNC79Q9P2D8 2635 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 EDDM13A0A1B0GTR0 161 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 TARSL2A2RTX5 802 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 K7ENP7 123 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 SPTLC2O15270 562 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 ACSL4O60488 711 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 LATS1O95835 1130 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 TRIM21P19474 475 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 C5AR1P21730 350 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 CSRP3P50461 194 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 ZNF445P59923 1031 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 ERVPABLB-1P60509 514 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 SKOR1P84550 965 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 CUL4AQ13619 759 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 MPP7Q5T2T1 576 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 INO80CQ6PI98 192 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 GOLGA5Q8TBA6 731 aa13.22□□□□□ -0.29
PRKCSH-210ENST00000589990 UBA3Q8TBC4 463 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms