RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 FOXN3O00409 490 aaPredicted RBP18.61■□□□□ 0.57
H3F3B-209ENST00000589949 MID1O15344 667 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 APOEP02649 317 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 ASLP04424 464 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 ERBB2P04626 1255 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 MZF1P28698 734 aaPredicted RBP18.61■□□□□ 0.57
H3F3B-209ENST00000589949 CLCN1P35523 988 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 MATKP42679 507 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 CENPCQ03188 943 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 OTUD1Q5VV17 481 aaPredicted RBP18.61■□□□□ 0.57
H3F3B-209ENST00000589949 OLFML1Q6UWY5 402 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 DBX2Q6ZNG2 339 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 FAM183BPQ6ZVS7 135 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 SLC47A2Q86VL8 602 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 MMAAQ8IVH4 418 aaKnown RBP18.61■□□□□ 0.57
H3F3B-209ENST00000589949 C1orf131Q8NDD1 294 aaKnown RBP18.61■□□□□ 0.57
H3F3B-209ENST00000589949 IGSF8Q969P0 613 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 PPP1R13BQ96KQ4 1090 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 NEUROG2Q9H2A3 272 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 PLCB1Q9NQ66 1216 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 FBXL12Q9NXK8 326 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 COX16Q9P0S2 106 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 KIAA1522Q9P206 1035 aaPredicted RBP18.61■□□□□ 0.57
H3F3B-209ENST00000589949 PCDHGC3Q9UN70 934 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 BTBD3Q9Y2F9 522 aa18.61■□□□□ 0.57
H3F3B-209ENST00000589949 ITIH6Q6UXX5 1313 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 A0A1W2PP55 124 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 FAM170AA1A519 330 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 TYW5A2RUC4 315 aaKnown RBP18.6■□□□□ 0.57
H3F3B-209ENST00000589949 GTPBP10A4D1E9 387 aaKnown RBP18.6■□□□□ 0.57
H3F3B-209ENST00000589949 FAM221BA6H8Z2 402 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 CAPNS1P04632 268 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 FTH1P19P0C7X4 201 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 ZNF883P0CG24 379 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 TFE3P19532 575 aaPredicted RBP18.6■□□□□ 0.57
H3F3B-209ENST00000589949 CD27P26842 260 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 GGCXP38435 758 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 AFF3P51826 1226 aaKnown RBP18.6■□□□□ 0.57
H3F3B-209ENST00000589949 METAP1P53582 386 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 GALCP54803 685 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 ST8SIA6P61647 398 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 ECT2LQ008S8 904 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 KCNJ12Q14500 433 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 CST6Q15828 149 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 MIIPQ5JXC2 388 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 CXorf57Q6NSI4 855 aaKnown RBP18.6■□□□□ 0.57
H3F3B-209ENST00000589949 FBXL22Q6P050 247 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 CCAR2Q8N163 923 aaKnown RBP18.6■□□□□ 0.57
H3F3B-209ENST00000589949 STK40Q8N2I9 435 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 AADATQ8N5Z0 425 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 ZNF557Q8N988 423 aaPredicted RBP18.6■□□□□ 0.57
H3F3B-209ENST00000589949 KDM1BQ8NB78 822 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 BAHD1Q8TBE0 780 aaPredicted RBP18.6■□□□□ 0.57
H3F3B-209ENST00000589949 PTPRN2Q92932 1015 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 ALG14Q96F25 216 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 TRIM62Q9BVG3 475 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 FAM204AQ9H8W3 233 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 SGK2Q9HBY8 427 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 ANLNQ9NQW6 1124 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.6■□□□□ 0.57
H3F3B-209ENST00000589949 DDIT4Q9NX09 232 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 DNAJC12Q9UKB3 198 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 ANKRD6Q9Y2G4 727 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 TMEM131Q92545 1883 aa18.6■□□□□ 0.57
H3F3B-209ENST00000589949 FAM47DPA6NHR8 397 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 I6L893 689 aaPredicted RBP18.59■□□□□ 0.57
H3F3B-209ENST00000589949 WNT9AO14904 365 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 CER1O95813 267 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 SRPRAP08240 638 aaKnown RBP18.59■□□□□ 0.57
H3F3B-209ENST00000589949 PDGFRAP16234 1089 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 MTIF2P46199 727 aaKnown RBP18.59■□□□□ 0.57
H3F3B-209ENST00000589949 CDK17Q00537 523 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 HNRNPDQ14103 355 aaKnown RBP18.59■□□□□ 0.57
H3F3B-209ENST00000589949 ZNF423Q2M1K9 1284 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 DPCR1Q3MIW9 517 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 TTC31Q49AM3 519 aaPredicted RBP18.59■□□□□ 0.57
H3F3B-209ENST00000589949 PTPN20Q4JDL3 420 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 HSP90AA4PQ58FG1 418 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 KIAA0895LQ68EN5 471 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 NCEH1Q6PIU2 408 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 USP30Q70CQ3 517 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 C14orf80Q86SX3 495 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 GLRX5Q86SX6 157 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 MLKLQ8NB16 471 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 GANCQ8TET4 914 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 OSGEPQ9NPF4 335 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 ASNSD1Q9NWL6 643 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 TOR4AQ9NXH8 423 aa18.59■□□□□ 0.57
H3F3B-209ENST00000589949 PLXNA2O75051 1894 aa18.58■□□□□ 0.57
H3F3B-209ENST00000589949 TARSL2A2RTX5 802 aaKnown RBP18.58■□□□□ 0.56
H3F3B-209ENST00000589949 F5H5T6 163 aa18.58■□□□□ 0.56
H3F3B-209ENST00000589949 GLI1P08151 1106 aa18.58■□□□□ 0.56
H3F3B-209ENST00000589949 SLC8A1P32418 973 aa18.58■□□□□ 0.56
H3F3B-209ENST00000589949 GRIA4P48058 902 aa18.58■□□□□ 0.56
H3F3B-209ENST00000589949 KCNMA1Q12791 1236 aa18.58■□□□□ 0.56
H3F3B-209ENST00000589949 IL27RAQ6UWB1 636 aa18.58■□□□□ 0.56
H3F3B-209ENST00000589949 FAM71AQ8IYT1 594 aa18.58■□□□□ 0.56
H3F3B-209ENST00000589949 ATP6V0D2Q8N8Y2 350 aa18.58■□□□□ 0.56
H3F3B-209ENST00000589949 SETD7Q8WTS6 366 aaKnown RBP18.58■□□□□ 0.56
H3F3B-209ENST00000589949 FRS2Q8WU20 508 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms