RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 SIN3BO75182 1162 aa21.8■■□□□ 1.08
TMC6-213ENST00000589933 GLI1P08151 1106 aa21.8■■□□□ 1.08
TMC6-213ENST00000589933 CCT8P50990 548 aa21.8■■□□□ 1.08
TMC6-213ENST00000589933 CST6Q15828 149 aa21.8■■□□□ 1.08
TMC6-213ENST00000589933 TPD52L1Q16890 204 aaPredicted RBP21.8■■□□□ 1.08
TMC6-213ENST00000589933 KIF19Q2TAC6 998 aa21.8■■□□□ 1.08
TMC6-213ENST00000589933 ZC3H12AQ5D1E8 599 aaKnown RBP21.8■■□□□ 1.08
TMC6-213ENST00000589933 EFHC1Q5JVL4 640 aa21.8■■□□□ 1.08
TMC6-213ENST00000589933 RAP1GAP2Q684P5 730 aa21.8■■□□□ 1.08
TMC6-213ENST00000589933 LMLNQ96KR4 655 aa21.8■■□□□ 1.08
TMC6-213ENST00000589933 CRACR2AQ9BSW2 395 aa21.8■■□□□ 1.08
TMC6-213ENST00000589933 ACE2Q9BYF1 805 aaPredicted RBP21.8■■□□□ 1.08
TMC6-213ENST00000589933 FAM204AQ9H8W3 233 aa21.8■■□□□ 1.08
TMC6-213ENST00000589933 PTPRBP23467 1997 aa21.79■■□□□ 1.08
TMC6-213ENST00000589933 KCNU1A8MYU2 1149 aa21.79■■□□□ 1.08
TMC6-213ENST00000589933 CBFA2T3O75081 653 aa21.79■■□□□ 1.08
TMC6-213ENST00000589933 RACK1P63244 317 aaKnown RBP21.79■■□□□ 1.08
TMC6-213ENST00000589933 PTK2Q05397 1052 aa21.79■■□□□ 1.08
TMC6-213ENST00000589933 PDCLQ13371 301 aa21.79■■□□□ 1.08
TMC6-213ENST00000589933 ARHGAP44Q17R89 818 aa21.79■■□□□ 1.08
TMC6-213ENST00000589933 INTS6Q9UL03 887 aaKnown RBP21.79■■□□□ 1.08
TMC6-213ENST00000589933 FZD4Q9ULV1 537 aa21.79■■□□□ 1.08
TMC6-213ENST00000589933 PLXNA2O75051 1894 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 SRRM3A6NNA2 597 aaPredicted RBP21.78■■□□□ 1.08
TMC6-213ENST00000589933 RNASEH2AO75792 299 aaKnown RBP21.78■■□□□ 1.08
TMC6-213ENST00000589933 ADH1BP00325 375 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 CCR1P32246 355 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 BNC1Q01954 994 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 EXOC3L4Q17RC7 722 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 FSCBQ5H9T9 825 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 MMAAQ8IVH4 418 aaKnown RBP21.78■■□□□ 1.08
TMC6-213ENST00000589933 PNPLA1Q8N8W4 532 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 MYO19Q96H55 970 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 MTG2Q9H4K7 406 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 ASNSD1Q9NWL6 643 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 KIAA1468Q9P260 1216 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 APEX2Q9UBZ4 518 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 SNX11Q9Y5W9 270 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 ITIH6Q6UXX5 1313 aa21.78■■□□□ 1.08
TMC6-213ENST00000589933 A0A1W2PP55 124 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 GTPBP10A4D1E9 387 aaKnown RBP21.77■■□□□ 1.08
TMC6-213ENST00000589933 MID1O15344 667 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 HSF2BPO75031 334 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 GADD45BO75293 160 aaPredicted RBP21.77■■□□□ 1.08
TMC6-213ENST00000589933 C5AR1P21730 350 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 SLC8A1P32418 973 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 GRK6P43250 576 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 MTIF2P46199 727 aaKnown RBP21.77■■□□□ 1.08
TMC6-213ENST00000589933 GALCP54803 685 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 SLC45A4Q5BKX6 768 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 C9orf64Q5T6V5 341 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 DBX2Q6ZNG2 339 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 SND1Q7KZF4 910 aaKnown RBP eCLIP21.77■■□□□ 1.088e-10■■□□□ 11.7
TMC6-213ENST00000589933 DSG4Q86SJ6 1040 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 OR2T34Q8NGX1 318 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 PPP1R13BQ96KQ4 1090 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 MRGPRX3Q96LB0 322 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 SYNCQ9H7C4 482 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 DDIT4Q9NX09 232 aa21.77■■□□□ 1.08
TMC6-213ENST00000589933 SYNJ2BP-COX16A0A087WUM0 186 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 A0A1B0GVM2 712 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 A0A1W2PPC4 97 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 TCAF2A6NFQ2 919 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 TTC34A8MYJ7 566 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 IGLV3-25P01717 112 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 KRT9P35527 623 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 PSMD8P48556 350 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 ELAVL3Q14576 367 aaKnown RBP21.76■■□□□ 1.07
TMC6-213ENST00000589933 MMS22LQ6ZRQ5 1243 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 FAM114A1Q8IWE2 563 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 NEUROG2Q9H2A3 272 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 COX16Q9P0S2 106 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 ADAMTS1Q9UHI8 967 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 CYTH4Q9UIA0 394 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 XPO7Q9UIA9 1087 aaKnown RBP21.76■■□□□ 1.07
TMC6-213ENST00000589933 SLC25A13Q9UJS0 675 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 FAM208BQ5VWN6 2430 aa21.76■■□□□ 1.07
TMC6-213ENST00000589933 PLXNB3Q9ULL4 1909 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 VILLO15195 856 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 TNFSF14O43557 240 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 PCDHGA12O60330 932 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 SLC9A1P19634 815 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 UBE2HP62256 183 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 OR6B2Q6IFH4 312 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 NCEH1Q6PIU2 408 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 C11orf57Q6ZUT1 292 aaPredicted RBP21.75■■□□□ 1.07
TMC6-213ENST00000589933 APCDD1Q8J025 514 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 DEFB106AQ8N104 65 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 CCAR2Q8N163 923 aaKnown RBP21.75■■□□□ 1.07
TMC6-213ENST00000589933 GALNT15Q8N3T1 639 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 SHC3Q92529 594 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 MYEOVQ96EZ4 313 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 RPL10LQ96L21 214 aaKnown RBP21.75■■□□□ 1.07
TMC6-213ENST00000589933 AASDHPPTQ9NRN7 309 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 SLCO3A1Q9UIG8 710 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 PCDHGC3Q9UN70 934 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 IGF2RP11717 2491 aa21.75■■□□□ 1.07
TMC6-213ENST00000589933 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.74■■□□□ 1.07
TMC6-213ENST00000589933 IL1BP01584 269 aa21.74■■□□□ 1.07
TMC6-213ENST00000589933 PDGFRAP16234 1089 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms