RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 WASH4PA8MWX3 477 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 ZNF487B1APH4 448 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 MAN2B1O00754 1011 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 DDX3YO15523 660 aaKnown RBP14.01□□□□□ -0.17
VMP1-210ENST00000589823 TULP3O75386 442 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 RHOCP08134 193 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 ERCC2P18074 760 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 CTHP32929 405 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 MAPKAPK2P49137 400 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 PEX5P50542 639 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 GNG11P61952 73 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 PRKCQQ04759 706 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 MMRN1Q13201 1228 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 GAB4Q2WGN9 574 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 ARTNQ5T4W7 220 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 C6orf118Q5T5N4 469 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 RNF43Q68DV7 783 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 GRAMD4Q6IC98 578 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 TPRG1Q6ZUI0 275 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 NUDT18Q6ZVK8 323 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 C12orf40Q86WS4 652 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 ETFBKMTQ8IXQ9 262 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 RTL3Q8N8U3 475 aaKnown RBP14.01□□□□□ -0.17
VMP1-210ENST00000589823 FIBINQ8TAL6 211 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.01□□□□□ -0.17
VMP1-210ENST00000589823 TSC1Q92574 1164 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 P2RY11Q96G91 374 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 SHDQ96IW2 340 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 PNKPQ96T60 521 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 ARHGEF3Q9NR81 526 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 KIAA1522Q9P206 1035 aaPredicted RBP14.01□□□□□ -0.17
VMP1-210ENST00000589823 FBXO10Q9UK96 956 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 NEU3Q9UQ49 428 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 TICRRQ7Z2Z1 1910 aa14.01□□□□□ -0.17
VMP1-210ENST00000589823 C3orf70A6NLC5 250 aaPredicted RBP14□□□□□ -0.17
VMP1-210ENST00000589823 APODP05090 189 aa14□□□□□ -0.17
VMP1-210ENST00000589823 AMPD1P23109 780 aa14□□□□□ -0.17
VMP1-210ENST00000589823 DEKP35659 375 aaKnown RBP14□□□□□ -0.17
VMP1-210ENST00000589823 OPRD1P41143 372 aa14□□□□□ -0.17
VMP1-210ENST00000589823 SLC6A11P48066 632 aa14□□□□□ -0.17
VMP1-210ENST00000589823 COPS2P61201 443 aa14□□□□□ -0.17
VMP1-210ENST00000589823 ZXDAP98168 799 aa14□□□□□ -0.17
VMP1-210ENST00000589823 KDSRQ06136 332 aa14□□□□□ -0.17
VMP1-210ENST00000589823 SLC12A1Q13621 1099 aa14□□□□□ -0.17
VMP1-210ENST00000589823 DPYSQ14117 519 aa14□□□□□ -0.17
VMP1-210ENST00000589823 ANKRD20A8PQ5CZ79 823 aa14□□□□□ -0.17
VMP1-210ENST00000589823 TFDP3Q5H9I0 405 aa14□□□□□ -0.17
VMP1-210ENST00000589823 TMCO3Q6UWJ1 677 aa14□□□□□ -0.17
VMP1-210ENST00000589823 MFSD7Q6UXD7 560 aa14□□□□□ -0.17
VMP1-210ENST00000589823 ZNF852Q6ZMS4 543 aa14□□□□□ -0.17
VMP1-210ENST00000589823 SPOCD1Q6ZMY3 1216 aa14□□□□□ -0.17
VMP1-210ENST00000589823 SETD3Q86TU7 594 aaPredicted RBP14□□□□□ -0.17
VMP1-210ENST00000589823 NLRP14Q86W24 1093 aa14□□□□□ -0.17
VMP1-210ENST00000589823 RFX6Q8HWS3 928 aa14□□□□□ -0.17
VMP1-210ENST00000589823 SUGP1Q8IWZ8 645 aaKnown RBP14□□□□□ -0.17
VMP1-210ENST00000589823 ALG3Q92685 438 aa14□□□□□ -0.17
VMP1-210ENST00000589823 FAF2Q96CS3 445 aa14□□□□□ -0.17
VMP1-210ENST00000589823 RNF157Q96PX1 679 aa14□□□□□ -0.17
VMP1-210ENST00000589823 P2RY13Q9BPV8 354 aa14□□□□□ -0.17
VMP1-210ENST00000589823 PRDM16Q9HAZ2 1276 aa14□□□□□ -0.17
VMP1-210ENST00000589823 ARHGEF4Q9NR80 690 aa14□□□□□ -0.17
VMP1-210ENST00000589823 ABCB8Q9NUT2 735 aa14□□□□□ -0.17
VMP1-210ENST00000589823 EIF2AK3Q9NZJ5 1116 aaKnown RBP14□□□□□ -0.17
VMP1-210ENST00000589823 DNAI1Q9UI46 699 aa14□□□□□ -0.17
VMP1-210ENST00000589823 CLEC4EQ9ULY5 219 aa14□□□□□ -0.17
VMP1-210ENST00000589823 TBC1D30Q9Y2I9 924 aa14□□□□□ -0.17
VMP1-210ENST00000589823 ILVBLA1L0T0 632 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 KCNK3O14649 394 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 DCXO43602 365 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 CISD3P0C7P0 127 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 PABPC1P11940 636 aaKnown RBP13.99□□□□□ -0.17
VMP1-210ENST00000589823 ZFXP17010 805 aaPredicted RBP13.99□□□□□ -0.17
VMP1-210ENST00000589823 IL4RP24394 825 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 SERPINB6P35237 376 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 ETFBP38117 255 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 CDKN2BP42772 138 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 GALK1P51570 392 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 GRSF1Q12849 480 aaKnown RBP eCLIP13.99□□□□□ -0.17
VMP1-210ENST00000589823 LMAN2Q12907 356 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 TFDP2Q14188 446 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 PON2Q15165 354 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 IER5LQ5T953 404 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 SEL1L2Q5TEA6 688 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 RNF219Q5W0B1 726 aaPredicted RBP13.99□□□□□ -0.17
VMP1-210ENST00000589823 KAZNQ674X7 775 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 CXorf57Q6NSI4 855 aaKnown RBP13.99□□□□□ -0.17
VMP1-210ENST00000589823 ANKS1BQ7Z6G8 1248 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 SIX5Q8N196 739 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 LZTR1Q8N653 840 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 PCDH19Q8TAB3 1148 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 WFDC5Q8TCV5 224 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 WFIKKN2Q8TEU8 576 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 FAM3CQ92520 227 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 CHFRQ96EP1 664 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 TLR10Q9BXR5 811 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 MUC3BQ9H195 1237 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 GGA2Q9UJY4 613 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 SLC27A6Q9Y2P4 619 aa13.99□□□□□ -0.17
VMP1-210ENST00000589823 MRPS17Q9Y2R5 130 aaKnown RBP13.99□□□□□ -0.17
VMP1-210ENST00000589823 COL4A2P08572 1712 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms