RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 OVGP1Q12889 678 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 IFRD2Q12894 506 aaPredicted RBP7.61□□□□□ -1.19
ZNF540-206ENST00000589117 SNX17Q15036 470 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 ZRSR2Q15696 482 aaKnown RBP7.61□□□□□ -1.19
ZNF540-206ENST00000589117 RAB6CQ53S08 254 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 TWF2Q6IBS0 349 aaKnown RBP7.61□□□□□ -1.19
ZNF540-206ENST00000589117 LRRC8BQ6P9F7 803 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 SH2D5Q6ZV89 423 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 PRPF39Q86UA1 669 aaKnown RBP7.61□□□□□ -1.19
ZNF540-206ENST00000589117 PIGZQ86VD9 579 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 LONP2Q86WA8 852 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 DEFB106AQ8N104 65 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 TMEM130Q8N3G9 435 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 C2orf69Q8N8R5 385 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 COLGALT1Q8NBJ5 622 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 KBTBD7Q8WVZ9 684 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 DNAJB3Q8WWF6 145 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 MYCBPQ99417 103 aaPredicted RBP7.61□□□□□ -1.19
ZNF540-206ENST00000589117 BTBD10Q9BSF8 475 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 MED10Q9BTT4 135 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 RAB6CQ9H0N0 254 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 OSBPL2Q9H1P3 480 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 DPEP3Q9H4B8 488 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 ALG13Q9NP73 1137 aaKnown RBP7.61□□□□□ -1.19
ZNF540-206ENST00000589117 BATF3Q9NR55 127 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 MCM8Q9UJA3 840 aa7.61□□□□□ -1.19
ZNF540-206ENST00000589117 KAT6AQ92794 2004 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 ERI2A8K979 691 aaKnown RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 CYB561D2O14569 222 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 MAP3K6O95382 1288 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 ITGBL1O95965 494 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 DLDP09622 509 aaKnown RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 FAM200BP0CF97 657 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 PTPN1P18031 435 aaKnown RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 PGAM1P18669 254 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 MX2P20592 715 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 BGNP21810 368 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 AMPD1P23109 780 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 LMO2P25791 158 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 CCNFP41002 786 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 GJA8P48165 433 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 PDE1BQ01064 536 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 ADIGQ0VDE8 80 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 SLC10A2Q12908 348 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 STX3Q13277 289 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 TRIP4Q15650 581 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 MROH9Q5TGP6 573 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 NCBP2-AS2Q69YL0 99 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 RSPH3Q86UC2 560 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 TLK2Q86UE8 772 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 FAM131BQ86XD5 332 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 WDR75Q8IWA0 830 aaKnown RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 TMEM86AQ8N2M4 240 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 SMC1BQ8NDV3 1235 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 RNF139Q8WU17 664 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 WNT8BQ93098 351 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 ARMC5Q96C12 935 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 TMEM120AQ9BXJ8 343 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 MMADHCQ9H3L0 296 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 C12orf49Q9H741 205 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 DCLRE1BQ9H816 532 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 MTMR10Q9NXD2 777 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 MOCS1Q9NZB8 636 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 TRIM33Q9UPN9 1127 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 SORCS3Q9UPU3 1222 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 C15orf41Q9Y2V0 281 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 Q9Y3F1 56 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 SBF1O95248 1867 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 MAGEB16A2A368 324 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 C17orf102A2RUQ5 167 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 M0QYT0 321 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 RNF103O00237 685 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 EEF2KO00418 725 aaKnown RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 CREB3O43889 395 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 GLRA3O75311 464 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 RFPL1O75677 317 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 ALDH1A2O94788 518 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 LUC7L3O95232 432 aaKnown RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 CBX6O95503 412 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 RPLP2P05387 115 aaKnown RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 MYL2P10916 166 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 LRPAP1P30533 357 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 INSCQ1MX18 579 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 C6orf163Q5TEZ5 329 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 TAF2Q6P1X5 1199 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 DENND5BQ6ZUT9 1274 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 LIMS2Q7Z4I7 341 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 CCDC185Q8N715 623 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 RFWD2Q8NHY2 731 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 PPP4R1Q8TF05 950 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 CLEC4CQ8WTT0 213 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 NSMCE1Q8WV22 266 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 BRI3BPQ8WY22 251 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 NT5C3BQ969T7 300 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 CCDC74AQ96AQ1 378 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 SLC7A6OSQ96CW6 309 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 P2RY11Q96G91 374 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 OXNAD1Q96HP4 312 aaPredicted RBP7.6□□□□□ -1.19
ZNF540-206ENST00000589117 OLFM3Q96PB7 478 aa7.6□□□□□ -1.19
ZNF540-206ENST00000589117 TRIM62Q9BVG3 475 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms