RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 K7EQS6 105 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 MYO1FO00160 1098 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 TRIM24O15164 1050 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 RNF40O75150 1001 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 TNFRSF4P43489 277 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 ZNF252P-AS1Q0IIN9 211 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 FBXL22Q6P050 247 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 Q6ZS52 159 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 NTAN1Q96AB6 310 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 C1orf74Q96LT6 269 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 SIK2Q9H0K1 926 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 CLEC4EQ9ULY5 219 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 ALG6Q9Y672 507 aa20.78■□□□□ 0.92
ATG4D-208ENST00000588667 WDFY4Q6ZS81 3184 aa20.77■□□□□ 0.92
ATG4D-208ENST00000588667 ADRA1BP35368 520 aa20.77■□□□□ 0.92
ATG4D-208ENST00000588667 GGCXP38435 758 aa20.77■□□□□ 0.92
ATG4D-208ENST00000588667 CKAP4Q07065 602 aaKnown RBP20.77■□□□□ 0.92
ATG4D-208ENST00000588667 SFTPA1Q8IWL2 248 aa20.77■□□□□ 0.92
ATG4D-208ENST00000588667 CFAP52Q8N1V2 620 aa20.77■□□□□ 0.92
ATG4D-208ENST00000588667 HES6Q96HZ4 224 aa20.77■□□□□ 0.92
ATG4D-208ENST00000588667 RPRD1AQ96P16 312 aaPredicted RBP20.77■□□□□ 0.92
ATG4D-208ENST00000588667 CARD6Q9BX69 1037 aa20.77■□□□□ 0.92
ATG4D-208ENST00000588667 TMPRSS4Q9NRS4 437 aa20.77■□□□□ 0.92
ATG4D-208ENST00000588667 STIM2Q9P246 746 aa20.77■□□□□ 0.92
ATG4D-208ENST00000588667 VANGL2Q9ULK5 521 aa20.77■□□□□ 0.92
ATG4D-208ENST00000588667 PACSIN2Q9UNF0 486 aaPredicted RBP20.77■□□□□ 0.92
ATG4D-208ENST00000588667 TMEM110-MUSTN1A8MSY1 372 aa20.76■□□□□ 0.91
ATG4D-208ENST00000588667 MIF4GDA9UHW6 222 aaKnown RBP20.76■□□□□ 0.91
ATG4D-208ENST00000588667 SRGAP2O75044 1071 aa20.76■□□□□ 0.91
ATG4D-208ENST00000588667 MTAPQ13126 283 aa20.76■□□□□ 0.91
ATG4D-208ENST00000588667 GAS6Q14393 721 aa20.76■□□□□ 0.91
ATG4D-208ENST00000588667 ANKS1BQ7Z6G8 1248 aa20.76■□□□□ 0.91
ATG4D-208ENST00000588667 MFN1Q8IWA4 741 aa20.76■□□□□ 0.91
ATG4D-208ENST00000588667 A0A1B0GVM2 712 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 TCAF2A6NFQ2 919 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 CES2O00748 559 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 RNF8O76064 485 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 COMTP21964 271 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 SLC1A1P43005 524 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 AIF1P55008 147 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 SCAPQ12770 1279 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 CDH18Q13634 790 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 C5orf22Q49AR2 442 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 SCYL2Q6P3W7 929 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 MAMSTRQ6ZN01 415 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 C14orf80Q86SX3 495 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 CCDC117Q8IWD4 279 aaPredicted RBP20.75■□□□□ 0.91
ATG4D-208ENST00000588667 ZNF683Q8IZ20 524 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 SPEM1Q8N4L4 309 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 CCDC185Q8N715 623 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 IGSF8Q969P0 613 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 PSMB7Q99436 277 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 NCAPGQ9BPX3 1015 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 SPATA6Q9NWH7 488 aaPredicted RBP20.75■□□□□ 0.91
ATG4D-208ENST00000588667 RNF14Q9UBS8 474 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 CHURC1-FNTBB4DL54 471 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 GALR2O43603 387 aaPredicted RBP20.75■□□□□ 0.91
ATG4D-208ENST00000588667 SPOPO43791 374 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 LUC7L3O95232 432 aaKnown RBP20.75■□□□□ 0.91
ATG4D-208ENST00000588667 HLA-FP30511 346 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 DNA2P51530 1060 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 SEC13P55735 322 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 MRPS21P82921 87 aaKnown RBP20.75■□□□□ 0.91
ATG4D-208ENST00000588667 ACAP1Q15027 740 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 GEN1Q17RS7 908 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 LRRC31Q6UY01 552 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.75■□□□□ 0.91
ATG4D-208ENST00000588667 FIBINQ8TAL6 211 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 WFDC5Q8TCV5 224 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 USP33Q8TEY7 942 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 PBKQ96KB5 322 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 BTBD6Q96KE9 485 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 PRRX2Q99811 253 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 OSBPL2Q9H1P3 480 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 IP6K2Q9UHH9 426 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 STARD13Q9Y3M8 1113 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 SNX10Q9Y5X0 201 aa20.75■□□□□ 0.91
ATG4D-208ENST00000588667 IGLV3-10A0A075B6K4 115 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 PRRT4C9JH25 899 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 KCNK3O14649 394 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 ATG13O75143 517 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 CHRM1P11229 460 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-208ENST00000588667 CXCR5P32302 372 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 KIR2DL1P43626 348 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-208ENST00000588667 NRG1Q02297 640 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-208ENST00000588667 PIGHQ14442 188 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-208ENST00000588667 EIF4HQ15056 248 aaKnown RBP20.74■□□□□ 0.91
ATG4D-208ENST00000588667 CCDC181Q5TID7 509 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 CIR1Q86X95 450 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-208ENST00000588667 C1orf210Q8IVY1 113 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 CARNMT1Q8N4J0 409 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 UBL4BQ8N7F7 174 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 NIPA2Q8N8Q9 360 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 RPLP0P6Q8NHW5 317 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 KCNV2Q8TDN2 545 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 WFIKKN2Q8TEU8 576 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 COG1Q8WTW3 980 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 CAPZA3Q96KX2 299 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 ABCB8Q9NUT2 735 aa20.74■□□□□ 0.91
ATG4D-208ENST00000588667 GGA2Q9UJY4 613 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms