RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 NDFIP2Q9NV92 336 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 HEY1Q9Y5J3 304 aa23.28■■□□□ 1.32
ACTN4-210ENST00000588618 CHD5Q8TDI0 1954 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 A0A1B0GVM2 712 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 TCAF2A6NFQ2 919 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 APOC4-APOC2K7ER74 178 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 TBL1XO60907 577 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 APOC2P02655 101 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 CDH4P55283 916 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 GBE1Q04446 702 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 C2orf54Q08AI8 447 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 C5orf22Q49AR2 442 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 PTCRAQ6ISU1 281 aaPredicted RBP23.27■■□□□ 1.32
ACTN4-210ENST00000588618 C1orf228Q6PIY5 440 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 PARM1Q6UWI2 310 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 VITQ6UXI7 678 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 BZW1Q7L1Q6 419 aaKnown RBP23.27■■□□□ 1.32
ACTN4-210ENST00000588618 MFSD6LQ8IWD5 586 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 TP53INP2Q8IXH6 220 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 NPWQ8N729 165 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 DEPDC1BQ8WUY9 529 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 FGF14Q92915 247 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 BHMTQ93088 406 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 RETREG1Q9H6L5 497 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 ZNF212Q9UDV6 495 aa23.27■■□□□ 1.32
ACTN4-210ENST00000588618 RIOK3O14730 519 aaKnown RBP23.26■■□□□ 1.31
ACTN4-210ENST00000588618 CLDN11O75508 207 aa23.26■■□□□ 1.31
ACTN4-210ENST00000588618 ECI2O75521 394 aa23.26■■□□□ 1.31
ACTN4-210ENST00000588618 MAP3K6O95382 1288 aa23.26■■□□□ 1.31
ACTN4-210ENST00000588618 PSMC3P17980 439 aa23.26■■□□□ 1.31
ACTN4-210ENST00000588618 OR1E1P30953 314 aa23.26■■□□□ 1.31
ACTN4-210ENST00000588618 SLC10A2Q12908 348 aaPredicted RBP23.26■■□□□ 1.31
ACTN4-210ENST00000588618 SMAD2Q15796 467 aaKnown RBP23.26■■□□□ 1.31
ACTN4-210ENST00000588618 NLRP14Q86W24 1093 aa23.26■■□□□ 1.31
ACTN4-210ENST00000588618 PLCD3Q8N3E9 789 aa23.26■■□□□ 1.31
ACTN4-210ENST00000588618 LZTR1Q8N653 840 aa23.26■■□□□ 1.31
ACTN4-210ENST00000588618 RPGRIP1Q96KN7 1286 aa23.26■■□□□ 1.31
ACTN4-210ENST00000588618 KLC2Q9H0B6 622 aa23.26■■□□□ 1.31
ACTN4-210ENST00000588618 LINC00597Q9H2U6 94 aa23.26■■□□□ 1.31
ACTN4-210ENST00000588618 TMEM248Q9NWD8 314 aa23.26■■□□□ 1.31
ACTN4-210ENST00000588618 NYNRINQ9P2P1 1898 aaKnown RBP23.26■■□□□ 1.31
ACTN4-210ENST00000588618 MFSD11O43934 449 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 KCTD19Q17RG1 926 aaPredicted RBP23.25■■□□□ 1.31
ACTN4-210ENST00000588618 ANO4Q32M45 955 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 CHST9Q7L1S5 443 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 CEP112Q8N8E3 955 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 C1orf54Q8WWF1 131 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 IRF7Q92985 503 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 ATP2A3Q93084 1043 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 SPHK2Q9NRA0 654 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 HOMER3Q9NSC5 361 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.25■■□□□ 1.31
ACTN4-210ENST00000588618 WASH4PA8MWX3 477 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 H0Y626 953 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 NFATC1O95644 943 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 NR2C2P49116 596 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 MAPKAPK2P49137 400 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 ZNF177Q13360 481 aaPredicted RBP23.25■■□□□ 1.31
ACTN4-210ENST00000588618 CDH18Q13634 790 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 PDGFRLQ15198 375 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 MPP7Q5T2T1 576 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 ADGRG2Q8IZP9 1017 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 CCDC33Q8N5R6 958 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 ACTL9Q8TC94 416 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 BBS2Q9BXC9 721 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 NUMBLQ9Y6R0 609 aa23.25■■□□□ 1.31
ACTN4-210ENST00000588618 SHROOM3Q8TF72 1996 aa23.24■■□□□ 1.31
ACTN4-210ENST00000588618 C2CD4DB7Z1M9 353 aa23.24■■□□□ 1.31
ACTN4-210ENST00000588618 ADH1CP00326 375 aa23.24■■□□□ 1.31
ACTN4-210ENST00000588618 OTUD4Q01804 1114 aaKnown RBP23.24■■□□□ 1.31
ACTN4-210ENST00000588618 FCHO2Q0JRZ9 810 aa23.24■■□□□ 1.31
ACTN4-210ENST00000588618 GRM2Q14416 872 aa23.24■■□□□ 1.31
ACTN4-210ENST00000588618 PAFAH1B3Q15102 231 aaKnown RBP23.24■■□□□ 1.31
ACTN4-210ENST00000588618 C6orf118Q5T5N4 469 aa23.24■■□□□ 1.31
ACTN4-210ENST00000588618 CARNMT1Q8N4J0 409 aa23.24■■□□□ 1.31
ACTN4-210ENST00000588618 NOA1Q8NC60 698 aaKnown RBP23.24■■□□□ 1.31
ACTN4-210ENST00000588618 ZFYVE19Q96K21 471 aa23.24■■□□□ 1.31
ACTN4-210ENST00000588618 TRMT61BQ9BVS5 477 aaKnown RBP23.24■■□□□ 1.31
ACTN4-210ENST00000588618 DDX47Q9H0S4 455 aaKnown RBP23.24■■□□□ 1.31
ACTN4-210ENST00000588618 PLK2Q9NYY3 685 aa23.24■■□□□ 1.31
ACTN4-210ENST00000588618 DTLQ9NZJ0 730 aa23.24■■□□□ 1.31
ACTN4-210ENST00000588618 CTAGE15A4D2H0 777 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 NEDD8-MDP1E9PL57 170 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 MCF2LO15068 1137 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 CTAGE8P0CG41 777 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 CYP1B1Q16678 543 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 EML3Q32P44 896 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 LY6G5CQ5SRR4 150 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 TRIM68Q6AZZ1 485 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 TTC27Q6P3X3 843 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 CTAGE6Q86UF2 777 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 MFN1Q8IWA4 741 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 CTAGE4Q8IX94 777 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 LRRN4Q8WUT4 740 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 ASIC4Q96FT7 647 aa23.23■■□□□ 1.31
ACTN4-210ENST00000588618 FRMD8P1Q9BZ68 369 aaPredicted RBP23.23■■□□□ 1.31
ACTN4-210ENST00000588618 CCDC188H7C350 402 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 RAMP2O60895 175 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 TFF2Q03403 129 aa23.22■■□□□ 1.31
ACTN4-210ENST00000588618 HTR4Q13639 388 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms