RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 SMAD3P84022 425 aaKnown RBP26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 RBM10P98175 930 aaKnown RBP26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 ALFQ53S48 1182 aa26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 AFMIDQ63HM1 303 aa26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 HTR3CQ8WXA8 447 aa26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 TCEAL4Q96EI5 215 aa26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 CELF6Q96J87 481 aaKnown RBP26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 FMO2Q99518 471 aa26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 PRKD2Q9BZL6 878 aa26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 TMEM248Q9NWD8 314 aa26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 AGO1Q9UL18 857 aaKnown RBP26.76■■□□□ 1.87
SCAMP4-210ENST00000588555 XYLBO75191 536 aa26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 RHOP08100 348 aa26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 PFKLP17858 780 aa26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 NRIP1P48552 1158 aa26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 KCNC3Q14003 757 aa26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 FAM182AQ5T1J6 154 aa26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 ZNF697Q5TEC3 545 aa26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 IZUMO3Q5VZ72 239 aa26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 HEATR6Q6AI08 1181 aaKnown RBP26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 HDAC11Q96DB2 347 aa26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 SLC46A2Q9BY10 475 aa26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 FUT8Q9BYC5 575 aa26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 STOML2Q9UJZ1 356 aa26.75■■□□□ 1.87
SCAMP4-210ENST00000588555 PAPLNO95428 1278 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 MX2P20592 715 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 GARSP41250 739 aaKnown RBP26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 PPIDQ08752 370 aaKnown RBP26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 HIBCHQ6NVY1 386 aaPredicted RBP26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 BBOF1Q8ND07 529 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 CCNYQ8ND76 341 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 LRRC45Q96CN5 670 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 P2RY11Q96G91 374 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 RPRD1AQ96P16 312 aaPredicted RBP26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 BRD8Q9H0E9 1235 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 NOL6Q9H6R4 1146 aaKnown RBP26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 C5orf60A6NFR6 353 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 F5H5T6 163 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 RFXAPO00287 272 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 GCATO75600 419 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 CKMP06732 381 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 AP1B1Q10567 949 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 SLC5A9Q2M3M2 681 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 RFWD3Q6PCD5 774 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 LEMD2Q8NC56 503 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 VN1R2Q8NFZ6 395 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 TIFAQ96CG3 184 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 ANAPC5Q9UJX4 755 aa26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 TPX2Q9ULW0 747 aaKnown RBP26.74■■□□□ 1.87
SCAMP4-210ENST00000588555 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 TRAV19A0A0A6YYK7 116 aa26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 CCDC195A0A1B0GUA6 201 aa26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 LATS1O95835 1130 aa26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 CAV1Q03135 178 aa26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 PRSS36Q5K4E3 855 aa26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 ADGRF1Q5T601 910 aa26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 RNASEH2BQ5TBB1 312 aaKnown RBP26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 Q6ZNB5 142 aa26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 TFAP2DQ7Z6R9 452 aa26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 LGI2Q8N0V4 545 aa26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 UMODL1-AS1Q8N2C9 162 aa26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 PAK5Q9P286 719 aa26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 FARP1Q9Y4F1 1045 aaPredicted RBP26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 REV3LO60673 3130 aa26.73■■□□□ 1.87
SCAMP4-210ENST00000588555 TNNT3P45378 269 aaPredicted RBP26.72■■□□□ 1.87
SCAMP4-210ENST00000588555 ELMSAN1Q6PJG2 1045 aa26.72■■□□□ 1.87
SCAMP4-210ENST00000588555 CIR1Q86X95 450 aaPredicted RBP26.72■■□□□ 1.87
SCAMP4-210ENST00000588555 CCDC110Q8TBZ0 833 aa26.72■■□□□ 1.87
SCAMP4-210ENST00000588555 MRPL38Q96DV4 380 aaKnown RBP26.72■■□□□ 1.87
SCAMP4-210ENST00000588555 PRICKLE1Q96MT3 831 aaPredicted RBP26.72■■□□□ 1.87
SCAMP4-210ENST00000588555 SLC39A8Q9C0K1 460 aa26.72■■□□□ 1.87
SCAMP4-210ENST00000588555 HELZP42694 1942 aaKnown RBP26.72■■□□□ 1.87
SCAMP4-210ENST00000588555 PDE4DIPQ5VU43 2346 aa26.72■■□□□ 1.87
SCAMP4-210ENST00000588555 SASH3O75995 380 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 NTHL1P78549 312 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 WASHC5Q12768 1159 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 CASP8Q14790 479 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 MREGQ8N565 214 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 CPT1BQ92523 772 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 PRO3102Q9H379 93 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 MTRF1LQ9UGC7 380 aaKnown RBP26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 NYNRINQ9P2P1 1898 aaKnown RBP26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 DDX6P26196 483 aaKnown RBP eCLIP26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 ZNF33AQ06730 810 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 TEAD2Q15562 447 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 GPR158Q5T848 1215 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 TMC3Q7Z5M5 1100 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 GRASPQ7Z6J2 395 aaPredicted RBP26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 DEPDC1BQ8WUY9 529 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 TSGA13Q96PP4 275 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 TXLNGYQ9BZA5 131 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 DONSONQ9NYP3 566 aa26.71■■□□□ 1.87
SCAMP4-210ENST00000588555 RNF103O00237 685 aa26.7■■□□□ 1.86
SCAMP4-210ENST00000588555 MAP2K7O14733 419 aa26.7■■□□□ 1.86
SCAMP4-210ENST00000588555 ZNF189O75820 626 aaPredicted RBP26.7■■□□□ 1.86
SCAMP4-210ENST00000588555 ACTN2P35609 894 aa26.7■■□□□ 1.86
SCAMP4-210ENST00000588555 HSPA9P38646 679 aaKnown RBP26.7■■□□□ 1.86
SCAMP4-210ENST00000588555 NDST2P52849 883 aa26.7■■□□□ 1.86
SCAMP4-210ENST00000588555 MORF4L2Q15014 288 aa26.7■■□□□ 1.86
SCAMP4-210ENST00000588555 HDXQ7Z353 690 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 1164.5 ms