RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 PPARGC1AQ9UBK2 798 aaKnown RBP12.23□□□□□ -0.45
SDHDP1-201ENST00000588055 VPS28Q9UK41 221 aa12.23□□□□□ -0.45
SDHDP1-201ENST00000588055 FZD10Q9ULW2 581 aa12.23□□□□□ -0.45
SDHDP1-201ENST00000588055 PLA2G4CQ9UP65 541 aa12.23□□□□□ -0.45
SDHDP1-201ENST00000588055 STARD13Q9Y3M8 1113 aa12.23□□□□□ -0.45
SDHDP1-201ENST00000588055 PCDHA13Q9Y5I0 950 aa12.23□□□□□ -0.45
SDHDP1-201ENST00000588055 SNX10Q9Y5X0 201 aa12.23□□□□□ -0.45
SDHDP1-201ENST00000588055 IGLV3-10A0A075B6K4 115 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 TMEM110-MUSTN1A8MSY1 372 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 PRRT4C9JH25 899 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 EEF2KO00418 725 aaKnown RBP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 DAPK3O43293 454 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 ALDH1A2O94788 518 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 LRIG2O94898 1065 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 PROSCO94903 275 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 PTMAP06454 111 aaKnown RBP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 HOXB2P14652 356 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 EPHB2P29323 1055 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 NTSR1P30989 418 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 CD70P32970 193 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 MAN1A1P33908 653 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 GJC1P36383 396 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 NNMTP40261 264 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 ARL4AP40617 200 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 ARHGAP25P42331 645 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 MAPKAPK2P49137 400 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 PTPN5P54829 565 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 NAP1L1P55209 391 aaKnown RBP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 SULT2A1Q06520 285 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 MESP2Q0VG99 397 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 LMAN2Q12907 356 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 FZD5Q13467 585 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 MESDQ14696 234 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 ANGPT1Q15389 498 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 C5orf22Q49AR2 442 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 FNDC3BQ53EP0 1204 aaKnown RBP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 BOLA3Q53S33 107 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 PPP6R3Q5H9R7 873 aaPredicted RBP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 PITRM1Q5JRX3 1037 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 MBLAC2Q68D91 279 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 ZC3H14Q6PJT7 736 aaKnown RBP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 SERPINA13PQ6UXR4 307 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 ZNF783Q6ZMS7 281 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 SYT13Q7L8C5 426 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 C14orf80Q86SX3 495 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 TXNDC5Q8NBS9 432 aaKnown RBP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 WFDC5Q8TCV5 224 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 HSPH1Q92598 858 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 EZH1Q92800 747 aaPredicted RBP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 MYEOVQ96EZ4 313 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 SNRNP25Q9BV90 132 aaKnown RBP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 C2orf49Q9BVC5 232 aaPredicted RBP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 POLMQ9NP87 494 aaPredicted RBP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 OSGEPQ9NPF4 335 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 PRMT8Q9NR22 394 aaPredicted RBP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 ELOVL2Q9NXB9 296 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 MPP6Q9NZW5 540 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 SLC25A13Q9UJS0 675 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 FBXO4Q9UKT5 387 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 CLEC4EQ9ULY5 219 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 MMP17Q9ULZ9 603 aa12.22□□□□□ -0.45
SDHDP1-201ENST00000588055 A0A0A6YYK5 440 aaPredicted RBP12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 DRGXA6NNA5 263 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 H3BRJ5 948 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 I6L893 689 aaPredicted RBP12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 ARHGAP6O43182 974 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 SPOPO43791 374 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 SYNCRIPO60506 623 aaKnown RBP12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 MTA2O94776 668 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 KRT7P08729 469 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 DLDP09622 509 aaKnown RBP12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 RHOQP17081 205 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 CSKP41240 450 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 KIR2DL1P43626 348 aaPredicted RBP12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 DGKEP52429 567 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 VAV2P52735 878 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 NRLP54845 237 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 KRT81Q14533 505 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 IFI16Q16666 785 aaKnown RBP12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 SMTNL2Q2TAL5 461 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 PLEKHG6Q3KR16 790 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 FUT11Q495W5 492 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 ALFQ53S48 1182 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 EGFLAMQ63HQ2 1017 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 MAMSTRQ6ZN01 415 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 ZNF354CQ86Y25 554 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 SFTPA1Q8IWL2 248 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 CCDC33Q8N5R6 958 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 IL17RCQ8NAC3 791 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 TSTD1Q8NFU3 115 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 TEKT4Q8WW24 435 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 P2RY11Q96G91 374 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 GPATCH2LQ9NWQ4 482 aa12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 BCCIPQ9P287 314 aaKnown RBP eCLIP12.21□□□□□ -0.45
SDHDP1-201ENST00000588055 ZNF318Q5VUA4 2279 aa12.21□□□□□ -0.46
SDHDP1-201ENST00000588055 RAMP2O60895 175 aa12.2□□□□□ -0.46
SDHDP1-201ENST00000588055 CNTN5O94779 1100 aa12.2□□□□□ -0.46
SDHDP1-201ENST00000588055 PAPSS2O95340 614 aaPredicted RBP12.2□□□□□ -0.46
SDHDP1-201ENST00000588055 APBB3O95704 486 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms