RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 LGALS13Q9UHV8 139 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 CAPN8A6NHC0 703 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 ITGA2BP08514 1039 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 ABHD2P08910 425 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 NFKB1P19838 968 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 MPSTP25325 297 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 BCAT1P54687 386 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 USP46P62068 366 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 SGO1Q5FBB7 561 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 LBX2Q6XYB7 198 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 SLC41A1Q8IVJ1 513 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 OLFM3Q96PB7 478 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 ILKAPQ9H0C8 392 aaPredicted RBP14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 EBF3Q9H4W6 596 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 CDHR5Q9HBB8 845 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 TCF7L2Q9NQB0 619 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 EPS15L1Q9UBC2 864 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 AFF4Q9UHB7 1163 aaKnown RBP14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 NEMP2A6NFY4 417 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 TK2O00142 265 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 MSI1O43347 362 aaKnown RBP14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 USP2O75604 605 aaPredicted RBP14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 MT-CYBP00156 380 aaPredicted RBP14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 FAM117BQ6P1L5 589 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 ILDR2Q71H61 639 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 ERO1BQ86YB8 467 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 ARFGAP1Q8N6T3 406 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 MRPL1Q9BYD6 325 aaKnown RBP14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 KLHL4Q9C0H6 718 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 TKTL2Q9H0I9 626 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 THAP1Q9NVV9 213 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 GPRC5DQ9NZD1 345 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 PLLPQ9Y342 182 aa14.06□□□□□ -0.16
CACNA1A-209ENST00000587525 URB1O60287 2271 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 ERI2A8K979 691 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 NOL3O60936 208 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 GLRA3O75311 464 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 TPP2P29144 1249 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 SERPINB9P50453 376 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 BST2Q10589 180 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 SYPL2Q5VXT5 272 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 ZNF470Q6ECI4 717 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 SATL1Q86VE3 508 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 AFAP1L2Q8N4X5 818 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 CMTM5Q96DZ9 223 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 VPS39Q96JC1 886 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 CAMKK2Q96RR4 588 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 SERPINI1Q99574 410 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 MIPEPQ99797 713 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 ARHGEF38Q9NXL2 777 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 MPP6Q9NZW5 540 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 RGS17Q9UGC6 210 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 TNFSF13BQ9Y275 285 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 STX16-NPEPL1H3BU86 382 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 TGFB3P10600 412 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 RPS12P25398 132 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 IRF9Q00978 393 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 SLC25A11Q02978 314 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 PDAP1Q13442 181 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 AGKQ53H12 422 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 MAP3K21Q5TCX8 1036 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 KCNMB4Q86W47 210 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 ZNF333Q96JL9 665 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 ZNF560Q96MR9 790 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 PDZD7Q9H5P4 517 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 NT5MQ9NPB1 228 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 SFMBT1Q9UHJ3 866 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 TDRKHQ9Y2W6 561 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 SPAG6O75602 509 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 PARNO95453 639 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 MT-ND1P03886 318 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 PITRM1Q5JRX3 1037 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 HFE2Q6ZVN8 426 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 KCTD15Q96SI1 283 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 CCT7Q99832 543 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 RBM22Q9NW64 420 aaKnown RBP eCLIP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 DSEQ9UL01 958 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 PPM1HQ9ULR3 514 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 DOLKQ9UPQ8 538 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 ACTL7BQ9Y614 415 aa14.05□□□□□ -0.16
CACNA1A-209ENST00000587525 NAV1Q8NEY1 1877 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 C2CD4BA6NLJ0 364 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 CHRNGP07510 517 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 OR4Q2P0C623 313 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 SETSIPP0DME0 302 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 ALADP13716 330 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 PHEXP78562 749 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 ARHGAP17Q68EM7 881 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 RBM44Q6ZP01 1051 aaKnown RBP14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 OXCT2Q9BYC2 517 aaPredicted RBP14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 SP110Q9HB58 689 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 PREBQ9HCU5 417 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 A8MX80 341 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 PDHXO00330 501 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 PRPF4O43172 522 aaKnown RBP eCLIP14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 PTPN7P35236 360 aa14.04□□□□□ -0.16
CACNA1A-209ENST00000587525 PARP6Q2NL67 630 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms