RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 FSCBQ5H9T9 825 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 PITRM1Q5JRX3 1037 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 NCEH1Q6PIU2 408 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 FOXR2Q6PJQ5 311 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 LAYNQ6UX15 382 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 DHX40Q8IX18 779 aaKnown RBP8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 SCUBE3Q8IX30 993 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 CARNMT1Q8N4J0 409 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 LMO3Q8TAP4 145 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 DQX1Q8TE96 717 aaKnown RBP8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 STK32AQ8WU08 396 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 HNRNPLLQ8WVV9 542 aaKnown RBP8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 SMARCE1Q969G3 411 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 MYEOVQ96EZ4 313 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 DHTKD1Q96HY7 919 aaPredicted RBP8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 SLC6A18Q96N87 628 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 FAM129BQ96TA1 746 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 OMDQ99983 421 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 TRIM62Q9BVG3 475 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 MIS12Q9H081 205 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 NUCKS1Q9H1E3 243 aaKnown RBP8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 EBF2Q9HAK2 575 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 FTSJ1Q9UET6 329 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 SERGEFQ9UGK8 458 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 HOOK1Q9UJC3 728 aaKnown RBP8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 CNTN6Q9UQ52 1028 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 ERVW-1Q9UQF0 538 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 NAALADL1Q9UQQ1 740 aa8.31□□□□□ -1.08
CAPNS1-203ENST00000586963 KNTC1P50748 2209 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 A0A1W2PR77 199 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 TRIM49BA6NDI0 452 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 TTC34A8MYJ7 566 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 ENC1O14682 589 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 PSMA7O14818 248 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 RNASEH2AO75792 299 aaKnown RBP8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 LDOC1O95751 146 aaPredicted RBP8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 ADH1BP00325 375 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 WNT1P04628 370 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 ITGAVP06756 1048 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 C5AR1P21730 350 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 CD38P28907 300 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 NNMTP40261 264 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 CTSOP43234 321 aaPredicted RBP8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 RXRGP48443 463 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 VASPP50552 380 aaPredicted RBP8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 NUCB2P80303 420 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 EIF4EBP2Q13542 120 aaPredicted RBP8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 KCNJ12Q14500 433 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 RNF219Q5W0B1 726 aaPredicted RBP8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 DHRS13Q6UX07 377 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 MMS22LQ6ZRQ5 1243 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 SND1Q7KZF4 910 aaKnown RBP eCLIP8.3□□□□□ -1.087e-7■■□□□ 11.5
CAPNS1-203ENST00000586963 MARCH9Q86YJ5 346 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 MMAAQ8IVH4 418 aaKnown RBP8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 ELOA2Q8IYF1 753 aaPredicted RBP8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 CFAP52Q8N1V2 620 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 EHBP1Q8NDI1 1231 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 SAP25Q8TEE9 199 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 PTPRN2Q92932 1015 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 KAT5Q92993 513 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 FAM131CQ96AQ9 280 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 FAM149B1Q96BN6 582 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 BTN2A3PQ96KV6 586 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 TIGD1Q96MW7 591 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 SLC4A5Q9BY07 1137 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 KDM4CQ9H3R0 1056 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 ERVMER34-1Q9H9K5 563 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 GDPD2Q9HCC8 539 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 GDF3Q9NR23 364 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 SLCO3A1Q9UIG8 710 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 ADAMTS20P59510 1910 aa8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 GOLGA4Q13439 2230 aaKnown RBP8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 MUC22E2RYF6 1773 aaPredicted RBP8.3□□□□□ -1.08
CAPNS1-203ENST00000586963 FAM149AA5PLN7 773 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 GOLGA6L4A6NEF3 574 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 TLR4O00206 839 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 CAPN9O14815 690 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 LATO43561 262 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 MOCS2O96007 188 aaPredicted RBP8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 IGLV3-25P01717 112 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 APOEP02649 317 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 ABCB4P21439 1286 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 TACR2P21452 398 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 MZF1P28698 734 aaPredicted RBP8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 NUDT1P36639 197 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 ARRB1P49407 418 aaPredicted RBP8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 PLK1P53350 603 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 ADPRHP54922 357 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 OXCT1P55809 520 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 NXPH1P58417 271 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 IL9RQ01113 521 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 SULT2A1Q06520 285 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 OVGP1Q12889 678 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 ELAVL3Q14576 367 aaKnown RBP8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 SHBQ15464 509 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 CCDC40Q4G0X9 1142 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 SLC45A4Q5BKX6 768 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 ZC3H12AQ5D1E8 599 aaKnown RBP8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 PRAMEF14Q5SWL7 426 aa8.29□□□□□ -1.08
CAPNS1-203ENST00000586963 SYPL2Q5VXT5 272 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms