RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SPATA32Q96LK8 384 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 CAAP1Q9H8G2 361 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 FZD4Q9ULV1 537 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 NCKAP1Q9Y2A7 1128 aa12.32□□□□□ -0.44
BRCA1-225ENST00000586385 SETXQ7Z333 2677 aaKnown RBP12.31□□□□□ -0.44
BRCA1-225ENST00000586385 CETN3O15182 167 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 LATO43561 262 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 STX10O60499 249 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 LDOC1O95751 146 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-225ENST00000586385 ASLP04424 464 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 BRD2P25440 801 aaKnown RBP12.31□□□□□ -0.44
BRCA1-225ENST00000586385 CD38P28907 300 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 PRCPP42785 496 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 RXRGP48443 463 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 PSMD8P48556 350 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 RPL34P49207 117 aaKnown RBP12.31□□□□□ -0.44
BRCA1-225ENST00000586385 SLC11A2P49281 568 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 NUMBP49757 651 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 STK19P49842 368 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-225ENST00000586385 RTP5Q14D33 572 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 INAVAQ3KP66 663 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 DCAF17Q5H9S7 520 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-225ENST00000586385 HES3Q5TGS1 186 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 ANKRD40Q6AI12 368 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 UNC45BQ8IWX7 931 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 STK40Q8N2I9 435 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 CARNMT1Q8N4J0 409 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 LMO3Q8TAP4 145 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 PTPRN2Q92932 1015 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 UBL7Q96S82 380 aaPredicted RBP12.31□□□□□ -0.44
BRCA1-225ENST00000586385 AASDHPPTQ9NRN7 309 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 ARHGAP20Q9P2F6 1191 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 NAALADL1Q9UQQ1 740 aa12.31□□□□□ -0.44
BRCA1-225ENST00000586385 FLNBO75369 2602 aaKnown RBP12.31□□□□□ -0.44
BRCA1-225ENST00000586385 ARID1BQ8NFD5 2236 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-225ENST00000586385 EDDM13A0A1B0GTR0 161 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 A0A1W2PQ27 194 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 A0A1W2PQ64 194 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 TARSL2A2RTX5 802 aaKnown RBP12.3□□□□□ -0.44
BRCA1-225ENST00000586385 LRRC72A6NJI9 287 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 ATXN7O15265 892 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-225ENST00000586385 SLC16A3O15427 465 aaKnown RBP12.3□□□□□ -0.44
BRCA1-225ENST00000586385 ZNF202O95125 648 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 LUC7L3O95232 432 aaKnown RBP12.3□□□□□ -0.44
BRCA1-225ENST00000586385 ITGAVP06756 1048 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 SRPRAP08240 638 aaKnown RBP12.3□□□□□ -0.44
BRCA1-225ENST00000586385 PAEPP09466 180 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 C1SP09871 688 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 JUPP14923 745 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 GOT1P17174 413 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 PITX1P78337 314 aaPredicted RBP12.3□□□□□ -0.44
BRCA1-225ENST00000586385 SEMG2Q02383 582 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 CNGA2Q16280 664 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 TCERG1LQ5VWI1 586 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 SYPL2Q5VXT5 272 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 TMEM270Q6UE05 265 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 PCSK4Q6UW60 755 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 TAC4Q86UU9 113 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 ENGASEQ8NFI3 743 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 FRS2Q8WU20 508 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 CCDC47Q96A33 483 aaKnown RBP12.3□□□□□ -0.44
BRCA1-225ENST00000586385 SERAC1Q96JX3 654 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 RPL10LQ96L21 214 aaKnown RBP12.3□□□□□ -0.44
BRCA1-225ENST00000586385 OMDQ99983 421 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 GDF3Q9NR23 364 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 KIAA1257Q9ULG3 409 aa12.3□□□□□ -0.44
BRCA1-225ENST00000586385 KALRNO60229 2985 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 TRIM49BA6NDI0 452 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 M0QYV0 167 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 TLR4O00206 839 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 RNASEH1O60930 286 aaKnown RBP12.29□□□□□ -0.44
BRCA1-225ENST00000586385 RTN2O75298 545 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 ABCB4P21439 1286 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 MZF1P28698 734 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-225ENST00000586385 ST8SIA6P61647 398 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 ECT2LQ008S8 904 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 NNTQ13423 1086 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 PNOCQ13519 176 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 EIF4EBP2Q13542 120 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-225ENST00000586385 CDH18Q13634 790 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 PROX2Q3B8N5 592 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 C6orf118Q5T5N4 469 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 ZNF557Q8N988 423 aaPredicted RBP12.29□□□□□ -0.44
BRCA1-225ENST00000586385 OR14C36Q8NHC7 312 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 SNIP1Q8TAD8 396 aaKnown RBP12.29□□□□□ -0.44
BRCA1-225ENST00000586385 RFFLQ8WZ73 363 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 SLC39A7Q92504 469 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 HSFY1Q96LI6 401 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 NRSN2Q9GZP1 204 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 MIS12Q9H081 205 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 ERVMER34-1Q9H9K5 563 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 SARDHQ9UL12 918 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 TLR6Q9Y2C9 796 aa12.29□□□□□ -0.44
BRCA1-225ENST00000586385 EIF4E1BA6NMX2 242 aaKnown RBP12.28□□□□□ -0.44
BRCA1-225ENST00000586385 TRIM38O00635 465 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 YKT6O15498 198 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 BRINP1O60477 761 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 MOCS2O96007 188 aaPredicted RBP12.28□□□□□ -0.44
BRCA1-225ENST00000586385 IGLV3-25P01717 112 aa12.28□□□□□ -0.44
BRCA1-225ENST00000586385 C5AR1P21730 350 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms