RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 CELSR3Q9NYQ7 3312 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 CAPN9O14815 690 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 VILLO15195 856 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 DKK1O94907 266 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 ASLP04424 464 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 GPD2P43304 727 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 PSMD8P48556 350 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 CLDN6P56747 220 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 STX17P56962 302 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 RACK1P63244 317 aaKnown RBP20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 ECT2LQ008S8 904 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 CETN1Q12798 172 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 USP30Q70CQ3 517 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 GALNT15Q8N3T1 639 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 OR14C36Q8NHC7 312 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 SERPINB11Q96P15 392 aa20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 UBE2TQ9NPD8 197 aaPredicted RBP20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 ANKRD11Q6UB99 2663 aaPredicted RBP20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 GOLGA4Q13439 2230 aaKnown RBP20.81■□□□□ 0.92
CLPTM1-204ENST00000585961 LRRC72A6NJI9 287 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 PLK4O00444 970 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 PMM2O15305 246 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 PCDHGA12O60330 932 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 LETM1O95202 739 aaPredicted RBP20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 LUC7L3O95232 432 aaKnown RBP20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 VAV1P15498 845 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 STK19P49842 368 aaPredicted RBP20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 PITX1P78337 314 aaPredicted RBP20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 KCNH2Q12809 1159 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 TAF5Q15542 800 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 CHSY1Q86X52 802 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 CIR1Q86X95 450 aaPredicted RBP20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 AADATQ8N5Z0 425 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 ZNF557Q8N988 423 aaPredicted RBP20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 NELFBQ8WX92 580 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 IRX2Q9BZI1 471 aaPredicted RBP20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 ACP6Q9NPH0 428 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 FTSJ1Q9UET6 329 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 SCML1Q9UN30 329 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 BAHCC1Q9P281 2608 aa20.8■□□□□ 0.92
CLPTM1-204ENST00000585961 ADAMTS20P59510 1910 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 SYNJ2BP-COX16A0A087WUM0 186 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 A0A1B0GTQ1 180 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 TARSL2A2RTX5 802 aaKnown RBP20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 PPP1R3GB7ZBB8 358 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 BIN1O00499 593 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 MOCS3O95396 460 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 IL1BP01584 269 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 ITGAVP06756 1048 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 TACR2P21452 398 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 SHBQ15464 509 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 SOWAHCQ53LP3 525 aaPredicted RBP20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 RNF219Q5W0B1 726 aaPredicted RBP20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 TTI2Q6NXR4 508 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 EID2Q8N6I1 236 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 OR2T34Q8NGX1 318 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 PTPRN2Q92932 1015 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 GTPBP4Q9BZE4 634 aaKnown RBP20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 COX16Q9P0S2 106 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 TJP2Q9UDY2 1190 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 CYTH4Q9UIA0 394 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 HOOK1Q9UJC3 728 aaKnown RBP20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 PTPRBP23467 1997 aa20.79■□□□□ 0.92
CLPTM1-204ENST00000585961 TBC1D3DA0A087WVF3 549 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 TBC1D3IA0A087WXS9 549 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 TBC1D3EA0A087X179 549 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 TBC1D3KA0A087X1G2 549 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 EDDM13A0A1B0GTR0 161 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 TBC1D3FA6NER0 549 aaPredicted RBP20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 TBC1D3LB9A6J9 549 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 PAPSS1O43252 624 aaPredicted RBP20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 LDOC1O95751 146 aaPredicted RBP20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 SRPRAP08240 638 aaKnown RBP20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 TBC1D3HP0C7X1 549 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 PDGFRAP16234 1089 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 GOT1P17174 413 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 ABCB4P21439 1286 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 BMP6P22004 513 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 MZF1P28698 734 aaPredicted RBP20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 CD38P28907 300 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 ACADSBP45954 432 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 METAP1P53582 386 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 SFSWAPQ12872 951 aaKnown RBP20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 BNIP3Q12983 259 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 DNAJC3Q13217 504 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 CAMK2BQ13554 666 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 ACAP1Q15027 740 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 SMAD1Q15797 465 aaKnown RBP20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 TBC1D3GQ6DHY5 549 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 TBC1D3CQ6IPX1 549 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 CREBRFQ8IUR6 639 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 TBC1D3Q8IZP1 549 aaPredicted RBP20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 SERAC1Q96JX3 654 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 ELF4Q99607 663 aaPredicted RBP20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 INTS2Q9H0H0 1204 aaKnown RBP20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 CTNND2Q9UQB3 1225 aa20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 URB1O60287 2271 aaKnown RBP20.78■□□□□ 0.92
CLPTM1-204ENST00000585961 E5RJQ4 531 aa20.77■□□□□ 0.92
CLPTM1-204ENST00000585961 DFNA5O60443 496 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms