RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 MATN1P21941 496 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 TNFRSF8P28908 595 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 PBX1P40424 430 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 VPS41P49754 854 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 ZNF84P51523 738 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 ANAPC15P60006 121 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 PTGR1Q14914 329 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 ASIC2Q16515 512 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 MINDY4Q4G0A6 757 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 FAM102BQ5T8I3 360 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 FAM90A2PQ658T7 463 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 NUGGCQ68CJ6 796 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 PDXDC1Q6P996 788 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 TRAPPC11Q7Z392 1133 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 KRT27Q7Z3Y8 459 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 TMEM199Q8N511 208 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 AKAP1Q92667 903 aaKnown RBP eCLIP3.32□□□□□ -1.88
VAPA-208ENST00000584796 CELF1Q92879 486 aaKnown RBP3.32□□□□□ -1.88
VAPA-208ENST00000584796 MIB2Q96AX9 1013 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 ZNF845Q96IR2 970 aaPredicted RBP3.32□□□□□ -1.88
VAPA-208ENST00000584796 SNX22Q96L94 193 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 PIMREGQ9BSJ6 248 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 MYLK2Q9H1R3 596 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 FZD3Q9NPG1 666 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 PCDHA7Q9UN72 937 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 THRAP3Q9Y2W1 955 aaKnown RBP3.32□□□□□ -1.88
VAPA-208ENST00000584796 PAPPAQ13219 1627 aa3.32□□□□□ -1.88
VAPA-208ENST00000584796 TRIP12Q14669 1992 aaPredicted RBP3.32□□□□□ -1.88
VAPA-208ENST00000584796 TOPAZ1Q8N9V7 1692 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 LMO7Q8WWI1 1683 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 TECPR2O15040 1411 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 NAIPQ13075 1403 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 KANK1Q14678 1352 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 hCG_2014768A0A024R1R8 64 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 GOLIM4O00461 696 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 ZBED1O96006 694 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 ARP10275 920 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 DLGAP5Q15398 846 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 SMTNL2Q2TAL5 461 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 PIK3CD-AS1Q5SR53 167 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 ASPHD1Q5U4P2 390 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 ZNF324BQ6AW86 544 aaPredicted RBP3.31□□□□□ -1.88
VAPA-208ENST00000584796 NXNQ6DKJ4 435 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 DARS2Q6PI48 645 aaKnown RBP3.31□□□□□ -1.88
VAPA-208ENST00000584796 CHST15Q7LFX5 561 aaPredicted RBP3.31□□□□□ -1.88
VAPA-208ENST00000584796 SRGAP1Q7Z6B7 1085 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 ADGRF4Q8IZF3 695 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 FAM177A1Q8N128 213 aaPredicted RBP3.31□□□□□ -1.88
VAPA-208ENST00000584796 FBXL14Q8N1E6 418 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 FAM156AQ8NDB6 213 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 TTLL2Q9BWV7 592 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 AS3MTQ9HBK9 375 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 VPS4AQ9UN37 437 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 PCDHB2Q9Y5E7 798 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 KAT6BQ8WYB5 2073 aa3.31□□□□□ -1.88
VAPA-208ENST00000584796 BTAF1O14981 1849 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 WDR90Q96KV7 1748 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 TNS3Q68CZ2 1445 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 PRAG1Q86YV5 1406 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 NINLQ9Y2I6 1382 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 A0A087WZ62 844 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 ANKRD62A6NC57 917 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 TTC34A8MYJ7 566 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 MGEA5O60502 916 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 IL18RAPO95256 599 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 SGPL1O95470 568 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 ANXA2P07355 339 aaKnown RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 RPL17P18621 184 aaKnown RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 DMWDQ09019 674 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 PGM5Q15124 567 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 ZNF628Q5EBL2 1059 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 ABLIM2Q6H8Q1 611 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 ZNF474Q6S9Z5 364 aaPredicted RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 KYAT3Q6YP21 454 aaKnown RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 USP43Q70EL4 1123 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 KRT28Q7Z3Y7 464 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 SPATA2LQ8IUW3 424 aaPredicted RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 RAVER1Q8IY67 606 aaKnown RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 TCEAL8Q8IYN2 117 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 CLASRPQ8N2M8 674 aaKnown RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 IQCF1Q8N6M8 205 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 MAGEB6Q8N7X4 407 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 ARL14EPQ8N8R7 260 aaPredicted RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 ZFPM2Q8WW38 1151 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 KAT2BQ92831 832 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 STRBPQ96SI9 672 aaKnown RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 WDR83Q9BRX9 315 aaKnown RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 NTPCRQ9BSD7 190 aaKnown RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 RBM38Q9H0Z9 239 aaKnown RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 ERVK-5Q9HDB9 667 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 HEYLQ9NQ87 328 aaPredicted RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 DDX20Q9UHI6 824 aaKnown RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 ANAPC4Q9UJX5 808 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 NOB1Q9ULX3 412 aaKnown RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 TCF20Q9UGU0 1960 aaKnown RBP3.3□□□□□ -1.88
VAPA-208ENST00000584796 QSER1Q2KHR3 1735 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 QRICH2Q9H0J4 1663 aa3.3□□□□□ -1.88
VAPA-208ENST00000584796 DLC1Q96QB1 1528 aa3.29□□□□□ -1.88
VAPA-208ENST00000584796 EMSYQ7Z589 1322 aa3.29□□□□□ -1.88
VAPA-208ENST00000584796 A6NNC1 897 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms