RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760		A0A1B0GTH6	734 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	SPAAR	A0A1B0GVQ0	90 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760		F5H5T6	163 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760		I6L893	689 aa	Predicted RBP	13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	DLD	P09622	509 aa	Known RBP	13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	ABCB4	P21439	1286 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	CXCR3	P49682	368 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	SULT1E1	P49888	294 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	RNASE9	P60153	205 aa	Known RBP	13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	CENPC	Q03188	943 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	ARID5A	Q03989	594 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	PTP4A2	Q12974	167 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	MTA1	Q13330	715 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	BYSL	Q13895	437 aa	Known RBP	13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	SLC25A52	Q3SY17	297 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	LPCAT2	Q7L5N7	544 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	ARC	Q7LC44	396 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	TMEFF1	Q8IYR6	380 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	CARNMT1	Q8N4J0	409 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	BAP1	Q92560	729 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	PCDHB18P	Q96TA0	734 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	TBCB	Q99426	244 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	ANLN	Q9NQW6	1124 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	TMEM74B	Q9NUR3	256 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	ARHGEF38	Q9NXL2	777 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	EVL	Q9UI08	416 aa	Predicted RBP	13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	KLK13	Q9UKR3	277 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	NEUROG3	Q9Y4Z2	214 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	IGF2R	P11717	2491 aa		13.75	□□□□□ -0.21
SREBF1-223	ENST00000584760	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760		A0A1B0GVM2	712 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	TCAF2	A6NFQ2	919 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	GOLGA8S	H3BPF8	625 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	ZBTB24	O43167	697 aa	Predicted RBP	13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	SYNCRIP	O60506	623 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	PAGE1	O75459	146 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	ADCY5	O95622	1261 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	ATP5B	P06576	529 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	C7	P10643	843 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	HLA-E	P13747	358 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	ENG	P17813	658 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	PTMS	P20962	102 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	GGCX	P38435	758 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	CSK	P41240	450 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	PTGER3	P43115	390 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	IRAK1	P51617	712 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	COPA	P53621	1224 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	GSC	P56915	257 aa	Predicted RBP	13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	SIM1	P81133	766 aa	Predicted RBP	13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	CAMK2G	Q13555	558 aa	Predicted RBP	13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	AUH	Q13825	339 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	CLEC16A	Q2KHT3	1053 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	FNDC3B	Q53EP0	1204 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	PITRM1	Q5JRX3	1037 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	BRMS1L	Q5PSV4	323 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	FBXL22	Q6P050	247 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	CIR1	Q86X95	450 aa	Predicted RBP	13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	ZNF366	Q8N895	744 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	SLC30A5	Q8TAD4	765 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	RNF34	Q969K3	372 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	TTC17	Q96AE7	1141 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	MYO19	Q96H55	970 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	C11orf70	Q9BRQ4	267 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	METTL5	Q9NRN9	209 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	USP36	Q9P275	1121 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	SLC12A6	Q9UHW9	1150 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	MSRB2	Q9Y3D2	182 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	HS3ST4	Q9Y661	456 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	CHD5	Q8TDI0	1954 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	GON4L	Q3T8J9	2241 aa		13.74	□□□□□ -0.21
SREBF1-223	ENST00000584760	ZFYVE26	Q68DK2	2539 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	NUMA1	Q14980	2115 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	ATXN2	Q99700	1313 aa	Known RBP	13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	ZZEF1	O43149	2961 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	PCDH15	Q96QU1	1955 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760		A0A1W2PQC6	194 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	ZNF217	O75362	1048 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	EPHX1	P07099	455 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	POLR2E	P19388	210 aa	Known RBP	13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	DEUP1	Q05D60	604 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	C5orf22	Q49AR2	442 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	SPDYC	Q5MJ68	293 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	RABGAP1L	Q5R372	815 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	CXorf57	Q6NSI4	855 aa	Known RBP	13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	METTL3	Q86U44	580 aa	Known RBP	13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	LUZP1	Q86V48	1076 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	PHF13	Q86YI8	300 aa	Predicted RBP	13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	SYT12	Q8IV01	421 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	ZNF683	Q8IZ20	524 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	CCAR2	Q8N163	923 aa	Known RBP	13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	EMC1	Q8N766	993 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	IGSF8	Q969P0	613 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	CFAP57	Q96MR6	1250 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	SYT11	Q9BT88	431 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	TKTL2	Q9H0I9	626 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	PRDM16	Q9HAZ2	1276 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	CBX8	Q9HC52	389 aa		13.73	□□□□□ -0.21
SREBF1-223	ENST00000584760	FSCN3	Q9NQT6	498 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms