RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 CBX4O00257 560 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 ZNF217O75362 1048 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 LATS1O95835 1130 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 ZNF883P0CG24 379 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 GABRG2P18507 467 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 WASP42768 502 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 STX17P56962 302 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 PCBP4P57723 403 aaKnown RBP11.59□□□□□ -0.55
CCDC47-206ENST00000584112 DAOAP59103 153 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 UBE2HP62256 183 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 TRIP4Q15650 581 aaPredicted RBP11.59□□□□□ -0.55
CCDC47-206ENST00000584112 HLA-BQ31612 363 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 FYB2Q5VWT5 728 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 BSPRYQ5W0U4 402 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 BHLHA9Q7RTU4 235 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 ANKS1BQ7Z6G8 1248 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 FAM217AQ8IXS0 508 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 RBBP8NLQ8NC74 664 aaPredicted RBP11.59□□□□□ -0.55
CCDC47-206ENST00000584112 EHBP1Q8NDI1 1231 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 LMO3Q8TAP4 145 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 IPO4Q8TEX9 1081 aaKnown RBP11.59□□□□□ -0.55
CCDC47-206ENST00000584112 SLC35F5Q8WV83 523 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 GOLGA1Q92805 767 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 HIC2Q96JB3 615 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 GABRG3Q99928 467 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 SRRTQ9BXP5 876 aaKnown RBP11.59□□□□□ -0.55
CCDC47-206ENST00000584112 SLC2A11Q9BYW1 496 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 ZDHHC5Q9C0B5 715 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 HCN2Q9UL51 889 aa11.59□□□□□ -0.55
CCDC47-206ENST00000584112 A0A1W2PQF6 199 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 YJEFN3A6XGL0 299 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 E7ENQ6 273 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 K7ENP7 123 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 FBXO21O94952 628 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 LCP1P13796 627 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 BRD2P25440 801 aaKnown RBP11.58□□□□□ -0.56
CCDC47-206ENST00000584112 MATKP42679 507 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 ZNF132P52740 706 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 MFAP3P55082 362 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 FOXK1P85037 733 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 STARD3Q14849 445 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 EIF4HQ15056 248 aaKnown RBP11.58□□□□□ -0.56
CCDC47-206ENST00000584112 MPPE1Q53F39 396 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 MSANTD2Q6P1R3 559 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 INO80CQ6PI98 192 aaPredicted RBP11.58□□□□□ -0.56
CCDC47-206ENST00000584112 RRAGAQ7L523 313 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 ARHGEF19Q8IW93 802 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 DHX40Q8IX18 779 aaKnown RBP11.58□□□□□ -0.56
CCDC47-206ENST00000584112 DDI1Q8WTU0 396 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 KCNE4Q8WWG9 221 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 TFAP2BQ92481 460 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 NDRG1Q92597 394 aaKnown RBP11.58□□□□□ -0.56
CCDC47-206ENST00000584112 EDEM1Q92611 657 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 KAT5Q92993 513 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 HSFY1Q96LI6 401 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 FAM81BQ96LP2 452 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 ACOX2Q99424 681 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 INTS2Q9H0H0 1204 aaKnown RBP11.58□□□□□ -0.56
CCDC47-206ENST00000584112 CALCOCO1Q9P1Z2 691 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 KIAA1468Q9P260 1216 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 RWDD2AQ9UIY3 292 aa11.58□□□□□ -0.56
CCDC47-206ENST00000584112 IGHV1OR15-9A0A0B4J2B8 117 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 RNF225M0QZC1 329 aaPredicted RBP11.57□□□□□ -0.56
CCDC47-206ENST00000584112 SART1O43290 800 aaKnown RBP11.57□□□□□ -0.56
CCDC47-206ENST00000584112 CER1O95813 267 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 LTFP02788 710 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 KRT5P13647 590 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 COL8A1P27658 744 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 RGS7P49802 495 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 MEA1Q16626 185 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 GEN1Q17RS7 908 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 ADGRF1Q5T601 910 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 PMF1Q6P1K2 205 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 ENOSF1Q7L5Y1 443 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 TICAM1Q8IUC6 712 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 UNC45BQ8IWX7 931 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 ZCCHC9Q8N567 271 aaKnown RBP11.57□□□□□ -0.56
CCDC47-206ENST00000584112 PIWIL1Q96J94 861 aaKnown RBP11.57□□□□□ -0.56
CCDC47-206ENST00000584112 IRX2Q9BZI1 471 aaPredicted RBP11.57□□□□□ -0.56
CCDC47-206ENST00000584112 CD248Q9HCU0 757 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 CD93Q9NPY3 652 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 THAP10Q9P2Z0 257 aaPredicted RBP11.57□□□□□ -0.56
CCDC47-206ENST00000584112 SFMBT1Q9UHJ3 866 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 STOML2Q9UJZ1 356 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 CNTN6Q9UQ52 1028 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 STON1Q9Y6Q2 735 aa11.57□□□□□ -0.56
CCDC47-206ENST00000584112 NIPBLQ6KC79 2804 aaeCLIP11.56□□□□□ -0.566e-8■□□□□ 9.1
CCDC47-206ENST00000584112 DOCK4Q8N1I0 1966 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 MED7O43513 233 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 TIMM44O43615 452 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 GNSP15586 552 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 ACADSBP45954 432 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 ARID5AQ03989 594 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 DNAJC3Q13217 504 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 CAMK4Q16566 473 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 NUGGCQ68CJ6 796 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 ZNF557Q8N988 423 aaPredicted RBP11.56□□□□□ -0.56
CCDC47-206ENST00000584112 WFIKKN2Q8TEU8 576 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 ERLEC1Q96DZ1 483 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 KREMEN1Q96MU8 473 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms