RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 GXYLT2A0PJZ3 443 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 SMTNL1A8MU46 457 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 ADAM20O43506 726 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 RECQL4O94761 1208 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 PDE8BO95263 885 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 TMEM225BP0DP42 221 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 KCNA2P16389 499 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 AVPR2P30518 371 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 HIBADHP31937 336 aaKnown RBP5.23□□□□□ -1.57
SS18-223ENST00000583595 ABCD1P33897 745 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 GRK5P34947 590 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 PPARGP37231 505 aaPredicted RBP5.23□□□□□ -1.57
SS18-223ENST00000583595 PBX3P40426 434 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 CPA2P48052 419 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 PCP4P48539 62 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 NDUFV1P49821 464 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 FOXL2P58012 376 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 HHEXQ03014 270 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 THOC5Q13769 683 aaKnown RBP5.23□□□□□ -1.57
SS18-223ENST00000583595 SCARB2Q14108 478 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 AASDHQ4L235 1098 aaPredicted RBP5.23□□□□□ -1.57
SS18-223ENST00000583595 RBM20Q5T481 1227 aaKnown RBP5.23□□□□□ -1.57
SS18-223ENST00000583595 DRICH1Q6PGQ1 229 aaPredicted RBP5.23□□□□□ -1.57
SS18-223ENST00000583595 IL27RAQ6UWB1 636 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 MON1AQ86VX9 555 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 SGMS1Q86VZ5 419 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 IQCA1Q86XH1 822 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 C1orf210Q8IVY1 113 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 IZUMO1Q8IYV9 350 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 SYNE4Q8N205 404 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 SUPT20HQ8NEM7 779 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 RFWD2Q8NHY2 731 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 AFAP1L1Q8TED9 768 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 ZNF503Q96F45 646 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 PRR11Q96HE9 360 aaPredicted RBP5.23□□□□□ -1.57
SS18-223ENST00000583595 CMTM3Q96MX0 182 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 WDFY2Q96P53 400 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 ZSWIM1Q9BR11 485 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.23□□□□□ -1.57
SS18-223ENST00000583595 ZCWPW1Q9H0M4 648 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 ZWILCHQ9H900 591 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 ABCF3Q9NUQ8 709 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 ARGLU1Q9NWB6 273 aaPredicted RBP5.23□□□□□ -1.57
SS18-223ENST00000583595 NKX1-2Q9UD57 310 aaPredicted RBP5.23□□□□□ -1.57
SS18-223ENST00000583595 CHORDC1Q9UHD1 332 aaPredicted RBP5.23□□□□□ -1.57
SS18-223ENST00000583595 STEAP1Q9UHE8 339 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 CD207Q9UJ71 328 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 SUFUQ9UMX1 484 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 DRG1Q9Y295 367 aaKnown RBP5.23□□□□□ -1.57
SS18-223ENST00000583595 TOPBP1Q92547 1522 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 ZNF608Q9ULD9 1512 aaPredicted RBP5.23□□□□□ -1.57
SS18-223ENST00000583595 ZBED9Q6R2W3 1325 aa5.23□□□□□ -1.57
SS18-223ENST00000583595 TRIM64A6NGJ6 449 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 GAGE10A6NGK3 116 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 TRIM64BA6NI03 449 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 LIPT2A6NK58 231 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 MYO1GB0I1T2 1018 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 TMEM232C9JQI7 657 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 NPIPB8E9PQR5 432 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 GRM8O00222 908 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 LEFTY2O00292 366 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 CYR61O00622 381 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 FYB1O15117 783 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 NKX2-8O15522 239 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 TBX10O75333 385 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 ENTPD3O75355 529 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 MTA2O94776 668 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 CCNDBP1O95273 360 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 TGDSO95455 350 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 SLPIP03973 132 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 PDHA1P08559 390 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 GNAT2P19087 354 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 ACRV1P26436 265 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 PPIFP30405 207 aaKnown RBP5.22□□□□□ -1.57
SS18-223ENST00000583595 PSMB10P40306 273 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 GPD2P43304 727 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 MMP14P50281 582 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 EIF4A1P60842 406 aaKnown RBP5.22□□□□□ -1.57
SS18-223ENST00000583595 HSD11B2P80365 405 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 CDK18Q07002 472 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 NEXNQ0ZGT2 675 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 KCNJ12Q14500 433 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 MIIPQ5JXC2 388 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 KAZNQ674X7 775 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 KLHL35Q6PF15 583 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 CYP20A1Q6UW02 462 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 CARNMT1Q8N4J0 409 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 PLD5Q8N7P1 536 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 OR52N2Q8NGI0 321 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 OSCP1Q8WVF1 389 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 KCNJ9Q92806 393 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 DPCDQ9BVM2 203 aaPredicted RBP5.22□□□□□ -1.57
SS18-223ENST00000583595 VN1R3Q9BXE9 311 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 HECAQ9UBI9 543 aaPredicted RBP5.22□□□□□ -1.57
SS18-223ENST00000583595 SEL1LQ9UBV2 794 aa5.22□□□□□ -1.57
SS18-223ENST00000583595 LIMA1Q9UHB6 759 aaKnown RBP5.22□□□□□ -1.57
SS18-223ENST00000583595 SMG6Q86US8 1419 aaKnown RBP5.22□□□□□ -1.57
SS18-223ENST00000583595 ABCC8Q09428 1581 aa5.21□□□□□ -1.57
SS18-223ENST00000583595 CCDC187A0A096LP49 1063 aa5.21□□□□□ -1.58
SS18-223ENST00000583595 C17orf113A0A1B0GUU1 675 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms