RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 HIPK3Q9H422 1215 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 CHMP2BQ9UQN3 213 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 CSDE1O75534 798 aaKnown RBP10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 TGDSO95455 350 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 TYK2P29597 1187 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 CLCNKBP51801 687 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 LONRF1Q17RB8 773 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 TTMPQ5BVD1 217 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 TIFABQ6ZNK6 161 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 NUDCD3Q8IVD9 361 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 SLC22A9Q8IVM8 553 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 RTL3Q8N8U3 475 aaKnown RBP10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 SLC43A3Q8NBI5 491 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 DQX1Q8TE96 717 aaKnown RBP10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 CCT6BQ92526 530 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 TWNKQ96RR1 684 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 PRDM10Q9NQV6 1147 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 SAR1AQ9NR31 198 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 PRRG1O14668 218 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 XYLBO75191 536 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 FGF1P05230 155 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 ADRA1DP25100 572 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 RBL1P28749 1068 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 SLCO1A2P46721 670 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 GALNT2Q10471 571 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 PSMD5Q16401 504 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 TIGD5Q53EQ6 642 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 TEX44Q53QW1 395 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 KCNT1Q5JUK3 1230 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 TRABD2AQ86V40 505 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 POP5Q969H6 163 aaKnown RBP10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 MAGEB10Q96LZ2 347 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 TBL1YQ9BQ87 522 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.37□□□□□ -0.751e-7■■■■■ 37.7
TRAPPC8-211ENST00000582539 FAM155AB1AL88 458 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 USP1O94782 785 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 ERCC2P18074 760 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 RECQLP46063 649 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 IL10RBQ08334 325 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 PRKD1Q15139 912 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 ZNF618Q5T7W0 954 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 LRRC8EQ6NSJ5 796 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 NECAB2Q7Z6G3 386 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 MPP5Q8N3R9 675 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 KIAA1958Q8N8K9 716 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 CPT1BQ92523 772 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 FCRL5Q96RD9 977 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 SEPT5Q99719 369 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 ZBED2Q9BTP6 218 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 POLR1EQ9GZS1 481 aaKnown RBP10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 PLEKHA4Q9H4M7 779 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 MRPL17Q9NRX2 175 aaKnown RBP10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 VTI1BQ9UEU0 232 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 TBC1D30Q9Y2I9 924 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 PRG3Q9Y2Y8 225 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 HES2Q9Y543 173 aa10.37□□□□□ -0.75
TRAPPC8-211ENST00000582539 TMEM114B3SHH9 223 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 DFFAO00273 331 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 MATN3O15232 486 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 ADH1AP07327 375 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 AMPD1P23109 780 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 ELK3P41970 407 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 CLCN5P51795 746 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 SLC12A1Q13621 1099 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 KCNJ11Q14654 390 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 C15orf59Q2T9L4 293 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 RNF43Q68DV7 783 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 AGMOQ6ZNB7 445 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 TBC1D1Q86TI0 1168 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 PRUNE1Q86TP1 453 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 CHCHD4Q8N4Q1 142 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 SEC16BQ96JE7 1060 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 SYTL2Q9HCH5 934 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 SH3BP1Q9Y3L3 701 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 CCT8L1PA6NM43 557 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 PTGESO14684 152 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 IL1BP01584 269 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 USP17L7P0C7H9 530 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 CHKAP35790 457 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 MAPK9P45984 424 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 PRAMEP78395 509 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 DNAL1Q4LDG9 190 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 ACAD11Q709F0 780 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 FAM9CQ8IZT9 166 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 MICALL1Q8N3F8 863 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 ZMAT2Q96NC0 199 aaKnown RBP10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 SERPINI1Q99574 410 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 CINPQ9BW66 212 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 AGPSO00116 658 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 SMIM24O75264 130 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 CHEK2O96017 543 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 CHRNA1P02708 482 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 EDN1P05305 212 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 SERPINF2P08697 491 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 KRT16P08779 473 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 DDX5P17844 614 aaKnown RBP10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 CCR3P51677 355 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 CDH4P55283 916 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 ARPP19P56211 112 aa10.36□□□□□ -0.75
TRAPPC8-211ENST00000582539 PDK4Q16654 411 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms