RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 MSS51Q4VC12 460 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PRSS36Q5K4E3 855 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 FNBP1LQ5T0N5 605 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 AFMIDQ63HM1 303 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HIBCHQ6NVY1 386 aaPredicted RBP6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 Q6ZNB5 142 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SYDE1Q6ZW31 735 aaPredicted RBP6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 OTOP3Q7RTS5 596 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TMC3Q7Z5M5 1100 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 BBS7Q8IWZ6 715 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CCDC13Q8IYE1 715 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZNF567Q8N184 647 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 AGGF1Q8N302 714 aaeCLIP6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RTL3Q8N8U3 475 aaKnown RBP6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CCDC89Q8N998 374 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SH3RF2Q8TEC5 729 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 GRK7Q8WTQ7 553 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TFB1MQ8WVM0 346 aaKnown RBP6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MRPS31Q92665 395 aaKnown RBP6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PRCCQ92733 491 aaPredicted RBP6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 USP13Q92995 863 aaPredicted RBP6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PLD4Q96BZ4 506 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RTP4Q96DX8 246 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SNF8Q96H20 258 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CEP295NLQ96MC4 621 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RUNDC3BQ96NL0 473 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 LRRC3BQ96PB8 259 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TRIM56Q9BRZ2 755 aaKnown RBP6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TXLNGYQ9BZA5 131 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 BRD8Q9H0E9 1235 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RAB17Q9H0T7 212 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ARFGAP3Q9NP61 516 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 FAM114A2Q9NRY5 505 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HOMER3Q9NSC5 361 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PIH1D1Q9NWS0 290 aaKnown RBP6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 UXTQ9UBK9 157 aaPredicted RBP6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ANAPC5Q9UJX4 755 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MAFFQ9ULX9 164 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CLEC4EQ9ULY5 219 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HPCAL4Q9UM19 191 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ASB3Q9Y575 518 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZFP37Q9Y6Q3 630 aaPredicted RBP6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PTPRSQ13332 1948 aa6.32□□□□□ -1.4
RNU4ATAC-201ENST00000580972 FNDC1Q4ZHG4 1894 aaPredicted RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 IGLV3-10A0A075B6K4 115 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 A0A0A0MRY4 1105 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TRAV19A0A0A6YYK7 116 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 A0A0D9SEW6 157 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SPDYE4A6NLX3 237 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 WASH4PA8MWX3 477 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RASA4BC9J798 803 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 F5H5T6 163 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 LEFTY2O00292 366 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 GFRA2O00451 464 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SOX1O00570 391 aaPredicted RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZBTB24O43167 697 aaPredicted RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RASA4O43374 803 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MAFKO60675 156 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 AVILO75366 819 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ERLIN1O75477 346 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PEX11BO96011 259 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 JCHAINP01591 159 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SHBGP04278 402 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SLC2A3P11169 496 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RHOQP17081 205 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CDC25CP30307 473 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HSPA9P38646 679 aaKnown RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 GARSP41250 739 aaKnown RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HARS2P49590 506 aaKnown RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 EPHA5P54756 1037 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TUBB4BP68371 445 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 BASP1P80723 227 aaKnown RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 KCNC3Q14003 757 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ADGRE1Q14246 886 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 IHHQ14623 411 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 KCNJ11Q14654 390 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PDK1Q15118 436 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SMAD1Q15797 465 aaKnown RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PABPC1LQ4VXU2 614 aaKnown RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 FSCBQ5H9T9 825 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ANKRD20A2Q5SQ80 823 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ANKRD20A1Q5TYW2 823 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ANKRD20A3Q5VUR7 823 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 NUGGCQ68CJ6 796 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 KLHDC10Q6PID8 442 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CAPN12Q6ZSI9 719 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 PDZD4Q76G19 769 aaPredicted RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 IGDCC3Q8IVU1 814 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 TDHQ8IZJ6 230 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ELMOD1Q8N336 334 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ATPAF2Q8N5M1 289 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CNTD1Q8N815 330 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 NAT8LQ8N9F0 302 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 ZSCAN18Q8TBC5 510 aaPredicted RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HNRNPLLQ8WVV9 542 aaKnown RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 HTR3CQ8WXA8 447 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 MYLIPQ8WY64 445 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 SMG7Q92540 1137 aaKnown RBP6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 RUBCNQ92622 972 aa6.31□□□□□ -1.4
RNU4ATAC-201ENST00000580972 CAVIN3Q969G5 261 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms