RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 NCEH1Q6PIU2 408 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 BEND5Q7L4P6 421 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 MMAAQ8IVH4 418 aaKnown RBP18.53■□□□□ 0.56
MKS1-209ENST00000580127 UBR7Q8N806 425 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 WFDC5Q8TCV5 224 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 LRIG1Q96JA1 1093 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 MED15Q96RN5 788 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 GDF3Q9NR23 364 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 SLCO1B1Q9Y6L6 691 aa18.53■□□□□ 0.56
MKS1-209ENST00000580127 A0A1W2PP55 124 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 MID1O15344 667 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 MAGEC1O60732 1142 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 LUC7L3O95232 432 aaKnown RBP18.52■□□□□ 0.56
MKS1-209ENST00000580127 SLC2A3P11169 496 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 NUDT1P36639 197 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 PITRM1Q5JRX3 1037 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 C6orf118Q5T5N4 469 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 C9orf64Q5T6V5 341 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 DHRS13Q6UX07 377 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 DSG4Q86SJ6 1040 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 OXR1Q8N573 874 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 OR14C36Q8NHC7 312 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 DQX1Q8TE96 717 aaKnown RBP18.52■□□□□ 0.56
MKS1-209ENST00000580127 LMLNQ96KR4 655 aa18.52■□□□□ 0.56
MKS1-209ENST00000580127 FCRL2Q96LA5 508 aaPredicted RBP18.52■□□□□ 0.56
MKS1-209ENST00000580127 TBC1D3DA0A087WVF3 549 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 TBC1D3IA0A087WXS9 549 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 TBC1D3EA0A087X179 549 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 TBC1D3KA0A087X1G2 549 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 TBC1D3FA6NER0 549 aaPredicted RBP18.51■□□□□ 0.55
MKS1-209ENST00000580127 TBC1D3LB9A6J9 549 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 MOCS2O96007 188 aaPredicted RBP18.51■□□□□ 0.55
MKS1-209ENST00000580127 TBC1D3HP0C7X1 549 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 BRD2P25440 801 aaKnown RBP18.51■□□□□ 0.55
MKS1-209ENST00000580127 GCNT1Q02742 428 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 DCAF6Q58WW2 860 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 TBC1D3GQ6DHY5 549 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 NADSYN1Q6IA69 706 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 TBC1D3CQ6IPX1 549 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 PRPF39Q86UA1 669 aaKnown RBP18.51■□□□□ 0.55
MKS1-209ENST00000580127 TBC1D3Q8IZP1 549 aaPredicted RBP18.51■□□□□ 0.55
MKS1-209ENST00000580127 LGI2Q8N0V4 545 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 FMR1NBQ8N0W7 255 aaPredicted RBP18.51■□□□□ 0.55
MKS1-209ENST00000580127 CFAP52Q8N1V2 620 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 ATP6V0D2Q8N8Y2 350 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 STK32AQ8WU08 396 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 SERAC1Q96JX3 654 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 BTN2A3PQ96KV6 586 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 KDM4CQ9H3R0 1056 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 MTG2Q9H4K7 406 aa18.51■□□□□ 0.55
MKS1-209ENST00000580127 NBEAQ8NFP9 2946 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 BICDL2A1A5D9 508 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 FAM149AA5PLN7 773 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 TTC34A8MYJ7 566 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 RNF225M0QZC1 329 aaPredicted RBP18.5■□□□□ 0.55
MKS1-209ENST00000580127 TLR4O00206 839 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 ENC1O14682 589 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 GNA14O95837 355 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 IL1BP01584 269 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 YWHAZP63104 245 aaKnown RBP18.5■□□□□ 0.55
MKS1-209ENST00000580127 IL9RQ01113 521 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 MTA1Q13330 715 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 ELAVL3Q14576 367 aaKnown RBP18.5■□□□□ 0.55
MKS1-209ENST00000580127 SOWAHCQ53LP3 525 aaPredicted RBP18.5■□□□□ 0.55
MKS1-209ENST00000580127 KCNT1Q5JUK3 1230 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 FAM46CQ5VWP2 391 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 LAYNQ6UX15 382 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 EHBP1Q8NDI1 1231 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 CLEC4CQ8WTT0 213 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 NXPE2Q96DL1 559 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 MYO19Q96H55 970 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 SLC39A13Q96H72 371 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 CNDP2Q96KP4 475 aaKnown RBP18.5■□□□□ 0.55
MKS1-209ENST00000580127 MRGPRX3Q96LB0 322 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 TIGD1Q96MW7 591 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 SLC6A18Q96N87 628 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 ORAI3Q9BRQ5 295 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 ERVMER34-1Q9H9K5 563 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.5■□□□□ 0.55
MKS1-209ENST00000580127 SLCO3A1Q9UIG8 710 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 INTS6Q9UL03 887 aaKnown RBP18.5■□□□□ 0.55
MKS1-209ENST00000580127 NAALADL1Q9UQQ1 740 aa18.5■□□□□ 0.55
MKS1-209ENST00000580127 ITIH6Q6UXX5 1313 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 F5H5T6 163 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 GABBR2O75899 941 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 KRT5P13647 590 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 PSMD8P48556 350 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 PMS1P54277 932 aaKnown RBP18.49■□□□□ 0.55
MKS1-209ENST00000580127 SNX16P57768 344 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 CCDC15Q0P6D6 951 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 CAMK2BQ13554 666 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 FSCBQ5H9T9 825 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 RABGAP1LQ5R372 815 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 TTC39BQ5VTQ0 682 aaPredicted RBP18.49■□□□□ 0.55
MKS1-209ENST00000580127 LRRC69Q6ZNQ3 347 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 RRAGAQ7L523 313 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 CHSY1Q86X52 802 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 GATAD2AQ86YP4 633 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 SPATA20Q8TB22 786 aa18.49■□□□□ 0.55
MKS1-209ENST00000580127 RNF34Q969K3 372 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms