RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 TCAF2A6NFQ2 919 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 FAM47DPA6NHR8 397 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 SIN3BO75182 1162 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 ADH1BP00325 375 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 CST6Q15828 149 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 SLC45A4Q5BKX6 768 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 KIAA0895LQ68EN5 471 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 C11orf57Q6ZUT1 292 aaPredicted RBP14.17□□□□□ -0.14
GGA3-208ENST00000579743 ZDHHC17Q8IUH5 632 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 DHX40Q8IX18 779 aaKnown RBP14.17□□□□□ -0.14
GGA3-208ENST00000579743 ZCCHC14Q8WYQ9 949 aaKnown RBP14.17□□□□□ -0.14
GGA3-208ENST00000579743 SHC3Q92529 594 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 BIRC7Q96CA5 298 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 ACE2Q9BYF1 805 aaPredicted RBP14.17□□□□□ -0.14
GGA3-208ENST00000579743 TM9SF3Q9HD45 589 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 RRN3Q9NYV6 651 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 ZMIZ1Q9ULJ6 1067 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 FZD4Q9ULV1 537 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 PCDHGC3Q9UN70 934 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 ANKRD6Q9Y2G4 727 aa14.17□□□□□ -0.14
GGA3-208ENST00000579743 CACNA1EQ15878 2313 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 SYNJ2BP-COX16A0A087WUM0 186 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 RNASEH2AO75792 299 aaKnown RBP14.16□□□□□ -0.14
GGA3-208ENST00000579743 FTH1P19P0C7X4 201 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 SLC9A1P19634 815 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 SLC8A1P32418 973 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 RACK1P63244 317 aaKnown RBP14.16□□□□□ -0.14
GGA3-208ENST00000579743 MAN2A1Q16706 1144 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 ACBD5Q5T8D3 534 aaPredicted RBP14.16□□□□□ -0.14
GGA3-208ENST00000579743 OR6B2Q6IFH4 312 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 GLRX5Q86SX6 157 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 DEFB106AQ8N104 65 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 CHCHD4Q8N4Q1 142 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 MSANTD4Q8NCY6 345 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 OR2T34Q8NGX1 318 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 ADAMTS14Q8WXS8 1223 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 IGSF8Q969P0 613 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 CAMK1GQ96NX5 476 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 RPRD1AQ96P16 312 aaPredicted RBP14.16□□□□□ -0.14
GGA3-208ENST00000579743 COX16Q9P0S2 106 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 SLC25A13Q9UJS0 675 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 PCOLCE2Q9UKZ9 415 aa14.16□□□□□ -0.14
GGA3-208ENST00000579743 FARP1Q9Y4F1 1045 aaPredicted RBP14.16□□□□□ -0.14
GGA3-208ENST00000579743 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.15□□□□□ -0.14
GGA3-208ENST00000579743 PES1O00541 588 aaKnown RBP14.15□□□□□ -0.14
GGA3-208ENST00000579743 TOP3BO95985 862 aaKnown RBP14.15□□□□□ -0.14
GGA3-208ENST00000579743 GOT1P17174 413 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 C5AR1P21730 350 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 PON1P27169 355 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 CCT8P50990 548 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 CCDC15Q0P6D6 951 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 ZNF177Q13360 481 aaPredicted RBP14.15□□□□□ -0.14
GGA3-208ENST00000579743 ELAVL3Q14576 367 aaKnown RBP14.15□□□□□ -0.14
GGA3-208ENST00000579743 FSCBQ5H9T9 825 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 FAM46CQ5VWP2 391 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 GJB7Q6PEY0 223 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 RAB44Q7Z6P3 723 aaPredicted RBP14.15□□□□□ -0.14
GGA3-208ENST00000579743 MMAAQ8IVH4 418 aaKnown RBP14.15□□□□□ -0.14
GGA3-208ENST00000579743 CCAR2Q8N163 923 aaKnown RBP14.15□□□□□ -0.14
GGA3-208ENST00000579743 C1orf131Q8NDD1 294 aaKnown RBP14.15□□□□□ -0.14
GGA3-208ENST00000579743 C1orf216Q8TAB5 229 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 GATA6Q92908 595 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 LMLNQ96KR4 655 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 CHMP5Q9NZZ3 219 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 ADAMTS1Q9UHI8 967 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 DNAJC12Q9UKB3 198 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 KLK13Q9UKR3 277 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 INTS6Q9UL03 887 aaKnown RBP14.15□□□□□ -0.14
GGA3-208ENST00000579743 STAP1Q9ULZ2 295 aa14.15□□□□□ -0.14
GGA3-208ENST00000579743 ITIH6Q6UXX5 1313 aa14.15□□□□□ -0.15
GGA3-208ENST00000579743 A0A1W2PP55 124 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 A0A1W2PPC4 97 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 FAM221BA6H8Z2 402 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 TTC34A8MYJ7 566 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 MID1O15344 667 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 CLDN11O75508 207 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 F9P00740 461 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 IL1BP01584 269 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 IGLV3-25P01717 112 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 TPM2P07951 284 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 ZNF18P17022 549 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 NOS2P35228 1153 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 GRK6P43250 576 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 PLK1P53350 603 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 GALCP54803 685 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 FAM193AP78312 1265 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 SLC6A3Q01959 620 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 NME3Q13232 169 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 KIF19Q2TAC6 998 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 ACCSLQ4AC99 568 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 C9orf64Q5T6V5 341 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 LRRC31Q6UY01 552 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 MMS22LQ6ZRQ5 1243 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 PASD1Q8IV76 773 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 TMEM35BQ8NCS4 154 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 OR8D1Q8WZ84 308 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 RPL10LQ96L21 214 aaKnown RBP14.14□□□□□ -0.15
GGA3-208ENST00000579743 MRGPRX3Q96LB0 322 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 CCDC114Q96M63 670 aa14.14□□□□□ -0.15
GGA3-208ENST00000579743 SLC2A13Q96QE2 648 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms