RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 ELMO3Q96BJ8 720 aa14.39□□□□□ -0.11
CSNK1D-211ENST00000579316 ATXN7L3BQ96GX2 97 aa14.39□□□□□ -0.11
CSNK1D-211ENST00000579316 APOLD1Q96LR9 279 aa14.39□□□□□ -0.11
CSNK1D-211ENST00000579316 TWNKQ96RR1 684 aa14.39□□□□□ -0.11
CSNK1D-211ENST00000579316 FAM129BQ96TA1 746 aa14.39□□□□□ -0.11
CSNK1D-211ENST00000579316 DUSP16Q9BY84 665 aa14.39□□□□□ -0.11
CSNK1D-211ENST00000579316 ABCG4Q9H172 646 aa14.39□□□□□ -0.11
CSNK1D-211ENST00000579316 KDM4CQ9H3R0 1056 aa14.39□□□□□ -0.11
CSNK1D-211ENST00000579316 KLHL11Q9NVR0 708 aa14.39□□□□□ -0.11
CSNK1D-211ENST00000579316 NLGN3Q9NZ94 848 aa14.39□□□□□ -0.11
CSNK1D-211ENST00000579316 CYTH4Q9UIA0 394 aa14.39□□□□□ -0.11
CSNK1D-211ENST00000579316 ITIH6Q6UXX5 1313 aa14.39□□□□□ -0.11
CSNK1D-211ENST00000579316 ITPR2Q14571 2701 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 KIF26BQ2KJY2 2108 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 NYNRINQ9P2P1 1898 aaKnown RBP14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 FFAR2O15552 330 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 C4BPAP04003 597 aaKnown RBP14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 MYF5P13349 255 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 CASP4P49662 377 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 SGSHP51688 502 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 ZSCAN23Q3MJ62 389 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 CCDC73Q6ZRK6 1079 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 TRIM69Q86WT6 500 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 C12orf56Q8IXR9 622 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 ARL14Q8N4G2 192 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 TAF4BQ92750 862 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 SGF29Q96ES7 293 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 EVA1BQ9NVM1 165 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 HBS1LQ9Y450 684 aaKnown RBP14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 ENTPD2Q9Y5L3 495 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 UBE4BO95155 1302 aa14.38□□□□□ -0.11
CSNK1D-211ENST00000579316 TBC1D3DA0A087WVF3 549 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 TBC1D3IA0A087WXS9 549 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 TBC1D3EA0A087X179 549 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 TBC1D3KA0A087X1G2 549 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 EDDM13A0A1B0GTR0 161 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 TBC1D3FA6NER0 549 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 TBC1D3LB9A6J9 549 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 PRAMEF26H0Y7S4 382 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 SLC7A4O43246 635 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 PIAS2O75928 621 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 RPN1P04843 607 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 TBC1D3HP0C7X1 549 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 ALPPL2P10696 532 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 DRD3P35462 400 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 TXLNAP40222 546 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 CSKP41240 450 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 PSMD8P48556 350 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 YWHAGP61981 247 aaKnown RBP eCLIP14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 STAT4Q14765 748 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 SGSM1Q2NKQ1 1148 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 RAB41Q5JT25 222 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 TBC1D3GQ6DHY5 549 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 TBC1D3CQ6IPX1 549 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 TBC1D3Q8IZP1 549 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 TMEM145Q8NBT3 493 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 IFI44Q8TCB0 444 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 EXTL1Q92935 676 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 KLHDC7BQ96G42 594 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 PSMG3-AS1Q96PY0 264 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 ARHGAP9Q9BRR9 750 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 UBXN6Q9BZV1 441 aa14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 OLA1Q9NTK5 396 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 FBXO2Q9UK22 296 aaPredicted RBP14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 INTS6Q9UL03 887 aaKnown RBP14.37□□□□□ -0.11
CSNK1D-211ENST00000579316 PMS2P1A4D2B8 440 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 LRRIQ3A6PVS8 624 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 RIOK3O14730 519 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 CLIC2O15247 247 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 PLRG1O43660 514 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 RNGTTO60942 597 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 CLSTN1O94985 981 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 GJB6O95452 261 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 ASS1P00966 412 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 SRPRAP08240 638 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 ITGA2BP08514 1039 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 FAM87AP0C7U9 286 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 TGM2P21980 687 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 MZF1P28698 734 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 STAT6P42226 847 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 KCNMA1Q12791 1236 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 C4orf17Q53FE4 359 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 PIK3R6Q5UE93 754 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 USP53Q70EK8 1073 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 WDR36Q8NI36 951 aaKnown RBP14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 FIBINQ8TAL6 211 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 PARD3BQ8TEW8 1205 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 NT5C1AQ9BXI3 368 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 OSBPL2Q9H1P3 480 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 ZSCAN16Q9H4T2 348 aaPredicted RBP14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 DOCK9Q9BZ29 2069 aa14.36□□□□□ -0.11
CSNK1D-211ENST00000579316 ABCA12Q86UK0 2595 aa14.35□□□□□ -0.11
CSNK1D-211ENST00000579316 TTC34A8MYJ7 566 aa14.35□□□□□ -0.11
CSNK1D-211ENST00000579316 SCAMP1O15126 338 aa14.35□□□□□ -0.11
CSNK1D-211ENST00000579316 IRAK2O43187 625 aa14.35□□□□□ -0.11
CSNK1D-211ENST00000579316 PPFIA2O75334 1257 aa14.35□□□□□ -0.11
CSNK1D-211ENST00000579316 TCEA3O75764 348 aa14.35□□□□□ -0.11
CSNK1D-211ENST00000579316 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
CSNK1D-211ENST00000579316 ELAVL3Q14576 367 aaKnown RBP14.35□□□□□ -0.11
CSNK1D-211ENST00000579316 ZACNQ401N2 412 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms