RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 SULT2A1Q06520 285 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 PTP4A2Q12974 167 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 SF3A2Q15428 464 aaKnown RBP15.31■□□□□ 0.04
SS18-212ENST00000579061 CCDC6Q16204 474 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 SKOR2Q2VWA4 1001 aaPredicted RBP15.31■□□□□ 0.04
SS18-212ENST00000579061 AASDHQ4L235 1098 aaPredicted RBP15.31■□□□□ 0.04
SS18-212ENST00000579061 PEAR1Q5VY43 1037 aaPredicted RBP15.31■□□□□ 0.04
SS18-212ENST00000579061 LYSMD4Q5XG99 296 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 TRNP1Q6NT89 227 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 SYT12Q8IV01 421 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 TMEFF1Q8IYR6 380 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 SLC30A5Q8TAD4 765 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 BAP1Q92560 729 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 IGSF8Q969P0 613 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 MYO19Q96H55 970 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 C1orf74Q96LT6 269 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 AGPAT1Q99943 283 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 C11orf70Q9BRQ4 267 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 SLC6A17Q9H1V8 727 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 CBX8Q9HC52 389 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 PRSS16Q9NQE7 514 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 METTL5Q9NRN9 209 aaKnown RBP15.31■□□□□ 0.04
SS18-212ENST00000579061 WSB2Q9NYS7 404 aaPredicted RBP15.31■□□□□ 0.04
SS18-212ENST00000579061 EVLQ9UI08 416 aaPredicted RBP15.31■□□□□ 0.04
SS18-212ENST00000579061 VANGL2Q9ULK5 521 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 CACNA1AO00555 2505 aa15.31■□□□□ 0.04
SS18-212ENST00000579061 LAMA1P25391 3075 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.3■□□□□ 0.04
SS18-212ENST00000579061 SLC30A4O14863 429 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 NDUFS2O75306 463 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 CLDN11O75508 207 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 ACADMP11310 421 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 CD6P30203 668 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 RDXP35241 583 aaKnown RBP15.3■□□□□ 0.04
SS18-212ENST00000579061 PTGER3P43115 390 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 PTPN9P43378 593 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 VASPP50552 380 aaPredicted RBP15.3■□□□□ 0.04
SS18-212ENST00000579061 ATXN1P54253 815 aaKnown RBP15.3■□□□□ 0.04
SS18-212ENST00000579061 CDH4P55283 916 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 ECT2LQ008S8 904 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 FOXK2Q01167 660 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 ZBTB16Q05516 673 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 NR1I3Q14994 352 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 HNRNPA1L2Q32P51 320 aaKnown RBP15.3■□□□□ 0.04
SS18-212ENST00000579061 CXorf57Q6NSI4 855 aaKnown RBP15.3■□□□□ 0.04
SS18-212ENST00000579061 PPP1R2P3Q6NXS1 205 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 ITIH6Q6UXX5 1313 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 IRF2BP2Q7Z5L9 587 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 ZNF683Q8IZ20 524 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 C3orf20Q8ND61 904 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 ERLEC1Q96DZ1 483 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 ZNF419Q96HQ0 510 aaPredicted RBP15.3■□□□□ 0.04
SS18-212ENST00000579061 MRGPRX3Q96LB0 322 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 CFAP57Q96MR6 1250 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 HAPLN3Q96S86 360 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 EDEM3Q9BZQ6 932 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 SIK2Q9H0K1 926 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 ANLNQ9NQW6 1124 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 ADAM22Q9P0K1 906 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 ERVW-1Q9UQF0 538 aa15.3■□□□□ 0.04
SS18-212ENST00000579061 NYNRINQ9P2P1 1898 aaKnown RBP15.29■□□□□ 0.04
SS18-212ENST00000579061 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.29■□□□□ 0.04
SS18-212ENST00000579061 TARSL2A2RTX5 802 aaKnown RBP15.29■□□□□ 0.04
SS18-212ENST00000579061 I6L893 689 aaPredicted RBP15.29■□□□□ 0.04
SS18-212ENST00000579061 SERPINC1P01008 464 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 SDC4P31431 198 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 TPMTP51580 245 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 ZNF33AQ06730 810 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 C1QBPQ07021 282 aaKnown RBP15.29■□□□□ 0.04
SS18-212ENST00000579061 ZNF177Q13360 481 aaPredicted RBP15.29■□□□□ 0.04
SS18-212ENST00000579061 LRRC31Q6UY01 552 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 MON1BQ7L1V2 547 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 STRADAQ7RTN6 431 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 RABEPKQ7Z6M1 372 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 C14orf80Q86SX3 495 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 CIR1Q86X95 450 aaPredicted RBP15.29■□□□□ 0.04
SS18-212ENST00000579061 APCDD1Q8J025 514 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 CADM4Q8NFZ8 388 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 RXFP2Q8WXD0 754 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 PIGKQ92643 395 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 FOXJ1Q92949 421 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 NAP1L5Q96NT1 182 aaPredicted RBP15.29■□□□□ 0.04
SS18-212ENST00000579061 SYT11Q9BT88 431 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 SMOC1Q9H4F8 434 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 CD93Q9NPY3 652 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 PILRBQ9UKJ0 227 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 TBC1D30Q9Y2I9 924 aa15.29■□□□□ 0.04
SS18-212ENST00000579061 IGLV3-10A0A075B6K4 115 aa15.28■□□□□ 0.04
SS18-212ENST00000579061 FAM170AA1A519 330 aa15.28■□□□□ 0.04
SS18-212ENST00000579061 C2CD4BA6NLJ0 364 aa15.28■□□□□ 0.04
SS18-212ENST00000579061 SIGLEC16A6NMB1 481 aa15.28■□□□□ 0.04
SS18-212ENST00000579061 DRGXA6NNA5 263 aa15.28■□□□□ 0.04
SS18-212ENST00000579061 KHNYNO15037 678 aaKnown RBP15.28■□□□□ 0.04
SS18-212ENST00000579061 GDF9O60383 454 aa15.28■□□□□ 0.04
SS18-212ENST00000579061 KRT3P12035 628 aa15.28■□□□□ 0.04
SS18-212ENST00000579061 PDGFRAP16234 1089 aa15.28■□□□□ 0.04
SS18-212ENST00000579061 MZF1P28698 734 aaPredicted RBP15.28■□□□□ 0.04
SS18-212ENST00000579061 NNMTP40261 264 aa15.28■□□□□ 0.04
SS18-212ENST00000579061 CCDC14Q49A88 953 aa15.28■□□□□ 0.04
SS18-212ENST00000579061 FIGNQ5HY92 759 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms